Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramazzottius_20varieornatus_20[genbank_20GCA_5F001949185.1_202016- 11-09] 200 sequences; 55,842,812 total letters Query= NC_004690.1 Length=113220 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 2e-11 >seq1 Length=9333084 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 15155 ACTAAATGAAGGGTGGAATCTTTTTGTATGTTGTAATCGCTTAGAATTCTCGCGTCTTCT 15214 || || ||||||||||| ||||| || |||||||| || ||| | || | ||||| Sbjct 5359986 ACCAAGTGAAGGGTGGACTCTTTCTGGATGTTGTAGTCAGATAGGGTCCTGCCATCTTCC 5360045 Query 15215 AATTGTTTGCCAGCGTATATCAAACGTTGTTGGTCGTTTGGAATTCCTTCTTTGTCACAA 15274 | |||||||| ||| | |||| ||| || ||||| ||||| ||||| || || Sbjct 5360046 AGCTGTTTGCCGGCGAAGATCAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTATCCTGG 5360105 Query 15275 ATTTTGCTCTTTACAATTTCTATGGTATCGCTATTTTCTACATCTAAGGTAATGGTTTTA 15334 || ||| ||| ||| | || || || || ||| || || || || ||||| || Sbjct 5360106 ATCTTGGCCTTGACATTCTCGATCGTGTCCGAGGCTTCCACCTCCAAAGTGATGGTCTTG 5360165 Query 15335 CCTGTCAGAGTTTTTACAAAAATTTGCAT 15363 || |||| || || || || || ||||| Sbjct 5360166 CCAGTCAACGTCTTGACGAAGATCTGCAT 5360194 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 362178317188200