Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramazzottius_20varieornatus_20[genbank_20GCA_5F001949185.1_202016- 11-09] 200 sequences; 55,842,812 total letters Query= NC_005336.1 Length=139962 Score E Sequences producing significant alignments: (Bits) Value seq2 82.4 7e-11 >seq2 Length=9028361 Score = 82.4 bits (90), Expect = 7e-11 Identities = 83/108 (77%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 5372 TTTCCGAAGTTAAACAGCACCACCCCGACATTGCCTCGGTAGTCTTCGTCGATAACGCCA 5431 || |||||||| || || || | |||||||| ||||||||||| |||| ||||| ||| Sbjct 7144575 TTGCCGAAGTTGAAAAGAACAATACCGACATTTCCTCGGTAGTCAGCGTCAATAACTCCA 7144634 Query 5432 GCGCCCACGTCGATAAAGTGTTTGACCGCAAGGCCGGAACGTGGTGCT 5479 || || || || ||||||| || | || || |||||||| || ||| Sbjct 7144635 GCTCCGACATCAATAAAGTTCTTTGCAGCCAGTCCGGAACGCGGGGCT 7144682 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 447749280624000