Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramazzottius_20varieornatus_20[genbank_20GCA_5F001949185.1_202016- 11-09] 200 sequences; 55,842,812 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq2 96.9 6e-15 >seq2 Length=9028361 Score = 96.9 bits (106), Expect = 6e-15 Identities = 158/226 (70%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 204179 AGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTG 204238 ||||| |||||| || || || || || || || || | || | ||| | |||| || Sbjct 7430505 AGGTGTTGGTTGACGACTTGGAACTCGCCAGAGAGGACTCGACGAGCGAAGATGTTGCTG 7430564 Query 204239 GTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATG 204298 ||| | ||||||| || ||||| |||| |||||| ||||||||||| || |||||| Sbjct 7430565 GTGTAGGGTTCGATGCTTTCATTGTTCCCGAGAATCTGCGCGGTGCTGGCGGTAGGCATG 7430624 Query 204299 GGAGCCAGGAGCAGGGAGTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAGGTC 204358 ||||||||||| || ||| || | ||| | | || | | ||| |||| | | Sbjct 7430625 GGAGCCAGGAGAAGACTGTTACGGAGACCATGCTGGGCGATCTTTGCCTTGAGAGCTGCC 7430684 Query 204359 CAGTCGTGC--ATCGCACTGGGTTTCACGCCCCACATGTCGAACTG 204402 ||||||||| || | | ||| |||| ||||||||| |||| Sbjct 7430685 CAGTCGTGCAGATTGGA--AGGTGTCACATTCCACATGTCATACTG 7430728 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795153212112000