Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramazzottius_20varieornatus_20[genbank_20GCA_5F001949185.1_202016- 11-09] 200 sequences; 55,842,812 total letters Query= NC_014766.1 Length=194022 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 5e-14 >seq2 Length=9028361 Score = 93.3 bits (102), Expect = 5e-14 Identities = 131/182 (72%), Gaps = 8/182 (4%) Strand=Plus/Minus Query 112809 CTTCAATTTGATATGTGGGAAGGTGAGACC----AAGCTTCACTACGACTGGGACGCTCT 112864 || || | ||| |||||| || |||| ||| || || ||| ||||||| ||||| Sbjct 7430731 CTCCAGTATGACATGTGG-AATGTGACACCTTCCAATCTGCAC---GACTGGGCAGCTCT 7430676 Query 112865 CAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAAC 112924 ||||| | ||| || | ||||| |||||||||||| | |||| || ||||| || Sbjct 7430675 CAAGGCAAAGATCGCCCAGCATGGTCTCCGTAACAGTCTTCTCCTGGCTCCCATGCCTAC 7430616 Query 112925 AGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACAT 112984 ||| |||||| || || | || || |||||| || | ||||||||||| | ||||| Sbjct 7430615 CGCCAGCACCGCGCAGATTCTCGGGAACAATGAAAGCATCGAACCCTACACCAGCAACAT 7430556 Query 112985 CT 112986 || Sbjct 7430555 CT 7430554 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 620740848144000