Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramazzottius_20varieornatus_20[genbank_20GCA_5F001949185.1_202016- 11-09] 200 sequences; 55,842,812 total letters Query= NC_014767.1 Length=184095 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 2e-13 seq7 82.4 9e-11 >seq2 Length=9028361 Score = 91.5 bits (100), Expect = 2e-13 Identities = 80/100 (80%), Gaps = 0/100 (0%) Strand=Plus/Plus Query 109754 AGATGTTAGTCGTGTAGGGTTCGAAACACTCATTGTTGCCTAGGATTTGTGCAGTGGAAG 109813 ||||||| | ||||||||||||| | |||||||| || || || || || ||| | Sbjct 7430554 AGATGTTGCTGGTGTAGGGTTCGATGCTTTCATTGTTCCCGAGAATCTGCGCGGTGCTGG 7430613 Query 109814 CTGTGGGCATGGGAGCCATGAGAAGACTGTTTCGGAGACC 109853 | || ||||||||||||| |||||||||||| |||||||| Sbjct 7430614 CGGTAGGCATGGGAGCCAGGAGAAGACTGTTACGGAGACC 7430653 >seq7 Length=2342111 Score = 82.4 bits (90), Expect = 9e-11 Identities = 105/145 (72%), Gaps = 0/145 (0%) Strand=Plus/Plus Query 11808 GAAGGGAACATTAGACTCACCAGCGATGGCTCGAGCGAGGAGAGTCTTACCCGTACCAGG 11867 |||||| || |||| ||| ||||| ||||| || || | ||||||||||||||| || Sbjct 1973095 GAAGGGGACGTTAGCCTCGCCAGCCGTGGCTTTGGCCAGCAAAGTCTTACCCGTACCGGG 1973154 Query 11868 TGCACCAGCGAGAAGGGCGCCACGGGGGATCTTGGCACCACTTCCAAAGTAGCGCTCAGG 11927 | ||||| || | |||||| |||||||||||| || | ||| || || || Sbjct 1973155 CGGACCAGTCAGGATGGCGCCTTTGGGGATCTTGGCCCCCAGCTCTGTGTACCGATCGGG 1973214 Query 11928 CTTCTTGAGGAAGTCCACAATCTCC 11952 ||||| | ||||| |||| |||| Sbjct 1973215 GTTCTTCAAGAAGTTGACAAACTCC 1973239 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 588974527560000