Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramazzottius_20varieornatus_20[genbank_20GCA_5F001949185.1_202016- 11-09] 200 sequences; 55,842,812 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq2 87.8 2e-12 >seq2 Length=9028361 Score = 87.8 bits (96), Expect = 2e-12 Identities = 171/248 (69%), Gaps = 5/248 (2%) Strand=Plus/Minus Query 76409 CTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACT--ACGACTGGGATGTTCTCA 76466 || |||| ||| |||||| || |||| ||| | | || ||||||||| | ||||| Sbjct 7430731 CTCCAGTATGACATGTGG-AATGTGACACCTTCCA-ATCTGCACGACTGGGCAGCTCTCA 7430674 Query 76467 AGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATGCCAACAG 76526 ||| | ||| || | ||||| |||||||||||| | |||| || ||||| || | Sbjct 7430673 AGGCAAAGATCGCCCAGCATGGTCTCCGTAACAGTCTTCTCCTGGCTCCCATGCCTACCG 7430614 Query 76527 CCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACAAACATCT 76586 || |||||| || || | || || |||||| || | ||||| ||||| | ||||||| Sbjct 7430613 CCAGCACCGCGCAGATTCTCGGGAACAATGAAAGCATCGAACCCTACACCAGCAACATCT 7430554 Query 76587 ACCTGAGAAGAACCCTCGCAGGTGAGTTTGTCATTGTCAACAAGCACCTCGTCAATGACC 76646 | | || |||| | || ||||| | |||||| | ||||| | ||||| Sbjct 7430553 TCGCTCGTCGAGTCCTCTCTGGCGAGTTCCAAGTCGTCAACCAACACCTTCTTCGTGACC 7430494 Query 76647 TCA-AGAA 76653 ||| |||| Sbjct 7430493 TCACAGAA 7430486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596568108576000