Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramazzottius_20varieornatus_20[genbank_20GCA_5F001949185.1_202016- 11-09] 200 sequences; 55,842,812 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq2 84.2 3e-11 >seq2 Length=9028361 Score = 84.2 bits (92), Expect = 3e-11 Identities = 136/196 (69%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | || || |||| ||||| ||||| || | || || |||| | | Sbjct 3913401 TGCAGATTTTCGTCAAGACGCTAACGGGAAAGACAATCACCCTCGAAGTGGAACCTTCAG 3913342 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | ||||| | ||||| || ||||| ||| || ||||||||||| || ||||| | Sbjct 3913341 ACACTATCGAGAATGTCAAGGCCAAAATTCAAGACAAGGAAGGCATTCCTCCGGATCAGC 3913282 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | ||||| ||||| || || || | || ||| |||| | | || || |||| Sbjct 3913281 AACGTCTCATCTTTGCCGGAAAGCAGCTGGAAGATGGCCGAACCCTGTCTGACTACAATA 3913222 Query 146212 TACAAAAAGAATCGAC 146227 | || ||||| ||||| Sbjct 3913221 TCCAGAAAGAGTCGAC 3913206 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 786164434584000