Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramazzottius_20varieornatus_20[genbank_20GCA_5F001949185.1_202016- 11-09] 200 sequences; 55,842,812 total letters Query= NC_026927.1 Length=228143 Score E Sequences producing significant alignments: (Bits) Value seq3 98.7 1e-15 >seq3 Length=5402078 Score = 98.7 bits (108), Expect = 1e-15 Identities = 99/129 (77%), Gaps = 0/129 (0%) Strand=Plus/Plus Query 161313 TCTACCAGGCATCCACCAGTGAGTTGTATGGGTTGGTACAAGAGACACCACAGAAAGAAA 161372 ||||||| || |||||||||||| | || || ||| || |||| || ||||| |||| Sbjct 1087840 TCTACCAAGCTTCCACCAGTGAGCTTTACGGCAAGGTCCAGGAGATCCCTCAGAAGGAAA 1087899 Query 161373 CAACACCTTTCTACCCACGATCTCCATATGGCGTAGCTAAACTCTATGGATATTGGATTG 161432 | || || |||||||| ||||| || ||||||||||| || || |||| || ||||| | Sbjct 1087900 CCACCCCGTTCTACCCGCGATCACCGTATGGCGTAGCCAAGCTGTATGCCTACTGGATCG 1087959 Query 161433 TAAAGAACT 161441 | | |||| Sbjct 1087960 TCATCAACT 1087968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 729927775176000