Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramazzottius_20varieornatus_20[genbank_20GCA_5F001949185.1_202016- 11-09] 200 sequences; 55,842,812 total letters Query= NC_028091.1 Length=196300 Score E Sequences producing significant alignments: (Bits) Value seq2 91.5 2e-13 >seq2 Length=9028361 Score = 91.5 bits (100), Expect = 2e-13 Identities = 172/248 (69%), Gaps = 5/248 (2%) Strand=Plus/Plus Query 110642 TTCT-TGAGGTCATTGACGAGGTGCTTGTTGACAATGACAAACTCACCTGCGAGGGTTCT 110700 |||| |||||||| | ||||| | |||||| | ||||| || | |||| || Sbjct 7430486 TTCTGTGAGGTCACGAAGAAGGTGTTGGTTGACGACTTGGAACTCGCCAGAGAGGACTCG 7430545 Query 110701 TCTCAGGTAGATGTTTGTTGTGTATGGTTCAAAGCATTCATTATTACCCAAGATTTGTGC 110760 | | ||||||| | ||||| ||||| | || |||||| || || | || || || Sbjct 7430546 ACGAGCGAAGATGTTGCTGGTGTAGGGTTCGATGCTTTCATTGTTCCCGAGAATCTGCGC 7430605 Query 110761 GGTGGAGGCTGTTGGCATTGGTGCCATCAAAAGACTGTTACGAAGACCCTTCTCCTTGAT 110820 |||| ||| || ||||| || |||| | |||||||||||| ||||| | || ||| Sbjct 7430606 GGTGCTGGCGGTAGGCATGGGAGCCAGGAGAAGACTGTTACGGAGACCATGCTGGGCGAT 7430665 Query 110821 GCGTTCCTTGAGAACATCCCAGTCGT--AGTTGAGCTTGGTTTCACCTTCCCACATGTCA 110878 | |||||||| | ||||||||| || | | ||| |||| || |||||||||| Sbjct 7430666 CTTTGCCTTGAGAGCTGCCCAGTCGTGCAGAT-TGGAAGGTGTCACATT-CCACATGTCA 7430723 Query 110879 AACTGAAG 110886 |||| || Sbjct 7430724 TACTGGAG 7430731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628030429920000