Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramazzottius_20varieornatus_20[genbank_20GCA_5F001949185.1_202016- 11-09] 200 sequences; 55,842,812 total letters Query= NC_029132.1 Length=140122 Score E Sequences producing significant alignments: (Bits) Value seq4 86.0 6e-12 >seq4 Length=4740345 Score = 86.0 bits (94), Expect = 6e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Plus Query 6553 GTGGTTCAGGTAGATATGCGCATCCCCCAACGTATGCACCAGCTCCCCAGGAACCAACCC 6612 ||||||||||||||| |||||||| |||| ||| || | | || | || || || Sbjct 2915677 GTGGTTCAGGTAGATGTGCGCATCACCCAGCGTGTGGATGAATTCTGCCGGTCTCAGACC 2915736 Query 6613 CACGACATGAGCGATCATGTACGTGAGCAGAGCGTAACTAGCAATGTTGAACGGCACCCC 6672 | |||||| ||||||||||| || | || | ||| || |||||||||||||| ||||| Sbjct 2915737 CGTGACATGCGCGATCATGTAGGTTAAAAGCGAGTAGCTGGCAATGTTGAACGGAACCCC 2915796 Score = 86.0 bits (94), Expect = 6e-12 Identities = 91/120 (76%), Gaps = 0/120 (0%) Strand=Plus/Minus Query 34673 GGGGTGCCGTTCAACATTGCTAGTTACGCTCTGCTCACGTACATGATCGCTCATGTCGTG 34732 ||||| |||||||||||||| || ||| | || | || ||||||||||| |||||| | Sbjct 2915796 GGGGTTCCGTTCAACATTGCCAGCTACTCGCTTTTAACCTACATGATCGCGCATGTCACG 2915737 Query 34733 GGGTTGGTTCCTGGGGAGCTGGTGCATACGTTGGGGGATGCGCATATCTACCTGAACCAC 34792 || || || | || | | || ||| |||| |||||||| ||||||||||||||| Sbjct 2915736 GGTCTGAGACCGGCAGAATTCATCCACACGCTGGGTGATGCGCACATCTACCTGAACCAC 2915677 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 448261279344000