Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramazzottius_20varieornatus_20[genbank_20GCA_5F001949185.1_202016- 11-09] 200 sequences; 55,842,812 total letters Query= NC_030394.2 Length=126965 Score E Sequences producing significant alignments: (Bits) Value seq4 100 2e-16 >seq4 Length=4740345 Score = 100 bits (110), Expect = 2e-16 Identities = 99/128 (77%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 29658 CGTGGTCAAGGTAGACGTGAGCATCTCCCAGGGTGTGGACAAACTCTCCCGGTTCTAGCC 29717 |||||| ||||||| ||| ||||| ||||| ||||||| || ||| ||||| || | Sbjct 2915676 CGTGGTTCAGGTAGATGTGCGCATCACCCAGCGTGTGGATGAATTCTGCCGGTCTCAGAC 2915735 Query 29718 CGGTGACGTGAGCCATCATGTACGTGAGGAGAGAGTAGCTGGCGATGTTAAAGGGCACCC 29777 | ||||| || || |||||||| || | || ||||||||||| ||||| || || |||| Sbjct 2915736 CCGTGACATGCGCGATCATGTAGGTTAAAAGCGAGTAGCTGGCAATGTTGAACGGAACCC 2915795 Query 29778 CGAGCCCC 29785 | || ||| Sbjct 2915796 CAAGACCC 2915803 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 406162209977200