Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Ramazzottius_20varieornatus_20[genbank_20GCA_5F001949185.1_202016- 11-09] 200 sequences; 55,842,812 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq14 95.1 1e-14 >seq14 Length=1536585 Score = 95.1 bits (104), Expect = 1e-14 Identities = 195/290 (67%), Gaps = 0/290 (0%) Strand=Plus/Plus Query 4803 TCAAATGGGTCTTGAATATAAGTGTCTATTAGTAGGCTATACATTTCAGAATGTATATTT 4862 ||| | ||||||| || || ||||| || || | ||| |||||||| ||||| | ||| Sbjct 515818 TCAGACGGGTCTTTGATGTACGTGTCGATCAGCAAGCTGTACATTTCCGAATGGACATTC 515877 Query 4863 TCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAACTTCGTTACAA 4922 || || || ||||| || ||||| || | | ||||| | || || ||||| | | Sbjct 515878 TCCATGGCGATCTGGAAGCCGTAGAATGAGCGGGCTTCAGGTATCTGGACTTCTTGCGAG 515937 Query 4923 AATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAAACGCCAAAACA 4982 || | || |||||||||||| || || ||||| || || || || || |||| | Sbjct 515938 AACCGCTCGGTTAAGTTTTCGTTGACGATGCCGTCGCTAGCGGCGAAGAAGGCCAGGATT 515997 Query 4983 TGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTT 5042 | | ||| |||||| || || || | ||||||| || ||||| | Sbjct 515998 GTACTGACGAAGAGCTGTTCTTCGTCATTCAGGCTGTTCCAGTCTTCCATGTCTTTGGCC 516057 Query 5043 AAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACAT 5092 | || |||||||| || ||||| || || || ||||| |||||||| Sbjct 516058 AGGTCTACTTCTTCCACGGTCCAGAAGGAGGCCGTTGCTTTCTTGTACAT 516107 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427048559066600