Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_002169.1 Length=135611 Score E Sequences producing significant alignments: (Bits) Value seq109567 120 3e-22 >seq109567 Length=8344 Score = 120 bits (132), Expect = 3e-22 Identities = 154/210 (73%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 |||||||| | || || ||||| |||||||||||||| || || || ||| || Sbjct 5772 ACCAAGTGAAGAGTGGATTCTTTCTGAATGTTGTAATCAGACAGGGTTCGGCCATCTTCC 5713 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || || || || |||||||||| || || || || || || || || |||||| | Sbjct 5712 AGTTGCTTGCCTGCAAAGATGAGACGTTGTTGGTCTGGTGGGATCCCTTCTTTGTCTTGA 5653 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 ||||| ||| || | || | |||||| | |||| || || || | ||| | ||||| Sbjct 5652 ATTTTGGTTTTCACATTCTCAATGGTGTCGCTTGCT-TCCACTTCTAGGGTTATTGTTTT 5594 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 ||| ||||| ||||| |||||||||||||| Sbjct 5593 GCCAGTCAGGGTTTTCACAAAAATCTGCAT 5564 Score = 98.7 bits (108), Expect = 9e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | || || ||||| || || ||||| || || || || ||| || Sbjct 5088 ACCAAATGAAGGGTTGATTCTTTCTGGATATTGTAGTCAGACAAGGTTCGGCCATCTTCC 5029 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||| |||||| | |||||||| || ||||| || || ||||| || |||||| | Sbjct 5028 AGTTGTTTGCCAGCGAAAATGAGACGTTGTTGATCTGGCGGGATGCCTTCTTTGTCTTGA 4969 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| || || | ||| | ||||| | ||| || || | || | ||| ||| Sbjct 4968 ATTTTCGTCTTTACATTTTCAATCGTGTCGCTTGGCTCAACTTCTAGAGTGATCGTCTTG 4909 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| ||||| || ||||||||||| Sbjct 4908 CCAGTCAAGGTTTTCACGAAAATCTGCAT 4880 Score = 93.3 bits (102), Expect = 4e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | || || ||||| || || ||||| || || || || ||| || Sbjct 5316 ACCAAATGAAGGGTCGATTCTTTCTGGATATTGTAGTCAGACAAGGTTCGACCATCTTCC 5257 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || ||||| |||||| | ||||||||||| || || || || ||||| || || ||| | Sbjct 5256 AGTTGTTTGCCAGCGAAAATGAGACGCTGTTGGTCTGGCGGGATGCCTTCTTTATCTTGA 5197 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTCCGTGCTCTCGACCTCGACGGTCACCGTTTTG 118709 ||||| || || | ||| | ||||| | ||| || || | || | ||| ||| Sbjct 5196 ATTTTCGTCTTCACGTTTTCAATCGTGTCGCTTGGCTCAACTTCTAGAGTGATCGTCTTG 5137 Query 118710 CCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| ||||| || ||||||||||| Sbjct 5136 CCAGTCAAGGTTTTCACGAAAATCTGCAT 5108 Score = 87.8 bits (96), Expect = 2e-12 Identities = 147/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 118530 ACCAAGTGGATTGTAGACTCTTTTTGAATGTTGTAATCGCTCATAGTGCGCGTATCCTCG 118589 ||||| || | || || || || || || ||||| || || || || ||| || Sbjct 5544 ACCAAATGAAGGGTTGATTCCTTCTGGATATTGTAGTCAGACAAGGTTCGACCATCTTCC 5485 Query 118590 AGCTGTTTTCCAGCGTAGATGAGACGCTGCTGATCGGGAGGTATGCCCTCCTTGTCTGTA 118649 || || || || || |||||||||| || ||||| || || || || || |||||| | Sbjct 5484 AGTTGCTTGCCTGCAAAGATGAGACGTTGTTGATCTGGTGGGATTCCTTCTTTGTCTTGA 5425 Query 118650 ATTTTTTGTTTAACCTGTTCGACGGTGTC-CGTGCTCTCGACCTCGACGGTCACCGTTTT 118708 || ||| || || | || | ||||| | ||| ||| ||||| | ||| | ||||| Sbjct 5424 ATCTTTGTCTTCACATTCTCAATTGTGTCGCTTGC-CTCAACCTCAAGGGTAATAGTTTT 5366 Query 118709 GCCGGTCAGAGTTTTTACAAAAATCTGCAT 118738 || |||| ||||| |||||||||||||| Sbjct 5365 ACCAGTCAAGGTTTTCACAAAAATCTGCAT 5336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 432925990104676