Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_002593.1 Length=100999 Score E Sequences producing significant alignments: (Bits) Value seq109567 95.1 8e-15 >seq109567 Length=8344 Score = 95.1 bits (104), Expect = 8e-15 Identities = 162/230 (70%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 34162 TCCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGA 34221 ||| || || || | || |||| ||| | ||| ||||||||| |||||||| || || Sbjct 5791 TCCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTCTGAATGTTGTAATCAGA 5732 Query 34222 CAGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGG 34280 ||| ||| | || |||| ||||||||||| || ||||| || || ||||| | || Sbjct 5731 CAGGGTTCGGCCATCTTCCAGTTGCTTGCCTGCAAAGATGAGACGTTGTTGGTCTGGTGG 5672 Query 34281 GCACGCTCTCCTTGTCGGCTATCTTTTGCTTT-AGATCGGCTATCGAATCGGTCGATTCG 34339 | | || || ||||| || ||| | ||| | || | || | ||| | | ||| Sbjct 5671 GATCCCT-TCTTTGTCTTGAAT-TTTGGTTTTCACATTCTCAATGGTGTCGCTTGCTTCC 5614 Query 34340 ACGTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || || | || || |||||||| || || ||||||||||| |||||||| Sbjct 5613 ACTTCTAGGGTTATTGTTTTGCCAGTCAGGGTTTTCACAAAAATCTGCAT 5564 Score = 89.7 bits (98), Expect = 3e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 34163 CCGCCGCGCAGCCTCAGCACCAGGTGTAAAGTACTTTCTTTCTGTATGTTGTAGTCGGAC 34222 || ||||| || | || |||| ||| | || ||||||||||||||||||||| | Sbjct 4878 CCACCGCGAAGACGAAGAACCAAGTGAAGGGTTGATTCTTTCTGTATGTTGTAGTCACTC 4819 Query 34223 AGCTGACGGTCGTCGTCCAACTGCTTGCCTGCGAAAATGAGCCGCTGCTGGTC-GACGGG 34281 | ||| | || || | || ||||| ||||| ||||| || || ||||| | |||| Sbjct 4818 AAAGTTCGGCCATCTTCGAGTTGTTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGCGGG 4759 Query 34282 CACGCTCTCCTTGTCGGCTATCTTTTGCTTTAGATCGGCTATCGAATCGGTCGATTCGAC 34341 | || || ||||| ||||| ||||| || | || | ||| | | ||| || Sbjct 4758 -ATGCCTTCTTTGTCTTGAATCTTCGTCTTTACATTCTCGATAGTATCACTGGGTTCAAC 4700 Query 34342 GTCCACCGTGATGGTTTTGCCGGTGAGAGTTTTCACAAAGATCTGCAT 34389 || | ||||| || ||||| || | |||||||||||||| ||||| Sbjct 4699 CTCAAGGGTGATAGTCTTGCCAGTTAAGGTTTTCACAAAGATTTGCAT 4652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 322398489075680