Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_002642.1 Length=144575 Score E Sequences producing significant alignments: (Bits) Value seq157723 120 3e-22 >seq157723 Length=4480 Score = 120 bits (132), Expect = 3e-22 Identities = 124/161 (77%), Gaps = 6/161 (4%) Strand=Plus/Plus Query 16505 ATATAAGTATCTATTAGTAAACTATACATTTCTGAATGAATATTCTCCATTGCTATCTGA 16564 || || |||||||| |||| ||||||||| |||||||| || || ||||||||||| || Sbjct 3101 ATGTATGTATCTATGAGTAGACTATACATCTCTGAATGGATGTTTTCCATTGCTATTTGG 3160 Query 16565 AAACCATAAAAGCATCTAGCTTCGGATATTTGTACTTC---AGAGTAAAACCTTTCTGCT 16621 |||||||||||||| | |||||| | | ||||||||| ||| || || || | Sbjct 3161 AAACCATAAAAGCAACGAGCTTCTGGCACTTGTACTTCTTGTGAGAAACAC---TCAACC 3217 Query 16622 AAGTTTTCGTTAACTATTCCATCGCTAGCTGCAAAAAACGC 16662 |||||||| || || || ||||| || || ||||| || || Sbjct 3218 AAGTTTTCATTCACAATACCATCACTGGCAGCAAAGAAGGC 3258 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 461523074185800