Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_003310.1 Length=196858 Score E Sequences producing significant alignments: (Bits) Value seq63152 136 5e-27 seq157723 111 2e-19 >seq63152 Length=2952 Score = 136 bits (150), Expect = 5e-27 Identities = 212/303 (70%), Gaps = 0/303 (0%) Strand=Plus/Minus Query 63542 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTGTCATAGAT 63601 ||| ||||| || || || |||| ||||||| || |||| | ||| || ||| | || Sbjct 585 TAGCCCTATACCACCAGCACTTTTTGAGATTAGAGCACATCTTGTTAGAGTCTCAAATAT 526 Query 63602 GCCTTCTATGCTATCATCGATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGAGT 63661 | || |||||||| | ||||| | ||||||||||| || | ||| | | Sbjct 525 ATCATCAATGCTATCTCCTGTCATGGCCAAAAGAAAACAGCTTGATAGTTGAGCTCTGTT 466 Query 63662 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGAAAGTAGATT 63721 || || |||||||| | || || || || || ||||||||| ||||||| | | ||| Sbjct 465 GGTACCAGCATTAAACAGTGTCGGTGATGCATGTGTAAACCATCTTTCAGACATCAAATT 406 Query 63722 GTACGTCTCAATAGCTGAGTCTATATCCCATTGATGAATTCCTACTGCGACACGCATTAA 63781 || || ||||||| ||||| ||||| ||| || || | || |||||||| || Sbjct 405 ATAAGTACCAATAGCGGAGTCAATATCTTCACCATGTATACCAATTGATACACGCATCAA 346 Query 63782 CATGTGCTGAGGTCTTTCAACAATTTTGTTGTTTATTTTCAACAAGTAGGATTTTTCCAA 63841 ||| || |||||||||||| ||||||| || | ||| || | ||| ||| | ||||| Sbjct 345 CATATGTTGAGGTCTTTCAGCAATTTTTCCATTGAGTTTTAAAAGGTAAGATCTCTCCAA 286 Query 63842 AGT 63844 || Sbjct 285 TGT 283 >seq157723 Length=4480 Score = 111 bits (122), Expect = 2e-19 Identities = 196/284 (69%), Gaps = 4/284 (1%) Strand=Plus/Plus Query 33755 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 33814 || |||||| | | ||||||||| || ||||| | |||||||| | || ||||| Sbjct 3007 ATTTATCCAATCTAAAGCCCAATCTGCTTTCTTCCTAACACAAGGGAGATGCTCAATGGC 3066 Query 33815 ATTAAAGAGATAGtttttttCATTACTATCT--TTAACATAAGTATCGATCAAAAGACTA 33872 ||| |||||| | | ||| ||| || || | || ||||| || | |||||| Sbjct 3067 ATTGAAGAGACGTTCTCGTTCC--ACTGGCTCCTTGATGTATGTATCTATGAGTAGACTA 3124 Query 33873 TACATTTCCGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTAGCCTCG 33932 ||||| || ||||| |||||||| || || || || || || || || || | ||| || Sbjct 3125 TACATCTCTGAATGGATGTTTTCCATTGCTATTTGGAAACCATAAAAGCAACGAGCTTCT 3184 Query 33933 GTAATCTGCACTTCTGTACAAAATCGTTCTGCTAAATTTTCATTCACTATTCCATCACTG 33992 | | || |||||| | || | || | || ||||||||||| || ||||||||| Sbjct 3185 GGCACTTGTACTTCTTGTGAGAAACACTCAACCAAGTTTTCATTCACAATACCATCACTG 3244 Query 33993 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTC 34036 || ||||| || || || | ||| || |||| | |||| || Sbjct 3245 GCAGCAAAGAAGGCTAAGATATGAGAGATGAAATGTCTTTCATC 3288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 628470947625840