Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_004105.1 Length=209771 Score E Sequences producing significant alignments: (Bits) Value seq63152 132 6e-26 seq157723 123 3e-23 seq164270 86.0 8e-12 >seq63152 Length=2952 Score = 132 bits (146), Expect = 6e-26 Identities = 211/303 (70%), Gaps = 0/303 (0%) Strand=Plus/Minus Query 72297 TAGACCTATTCCCCCTGCCATTTTAGAGATTAATGCGCATCGTTTTAACGTATCATAGAT 72356 ||| ||||| || || || |||| ||||||| || |||| | ||| || ||| | || Sbjct 585 TAGCCCTATACCACCAGCACTTTTTGAGATTAGAGCACATCTTGTTAGAGTCTCAAATAT 526 Query 72357 GCCCTCTATACTATCATCCATCATGTTAAGTAGAAAACAGCTAGACATTTGGTGACGACT 72416 | || || ||||| | ||||| | ||||||||||| || | ||| | | Sbjct 525 ATCATCAATGCTATCTCCTGTCATGGCCAAAAGAAAACAGCTTGATAGTTGAGCTCTGTT 466 Query 72417 AGTTCCCGCATTAAATAAGGTAGGAGAAGCGTGCGTAAACCATTTTTCAGACAGTAGATT 72476 || || |||||||| | || || || || || ||||||||| ||||||||| | ||| Sbjct 465 GGTACCAGCATTAAACAGTGTCGGTGATGCATGTGTAAACCATCTTTCAGACATCAAATT 406 Query 72477 GTACGTCTCAATAGCTGATTCTATATCCCATTGATGTATTCCTACCGCGACACGCATTAA 72536 || || ||||||| || || ||||| |||||| || | | |||||||| || Sbjct 405 ATAAGTACCAATAGCGGAGTCAATATCTTCACCATGTATACCAATTGATACACGCATCAA 346 Query 72537 CATATGCTGAGGTCTTTCAACGATCTTGTTATTTATTTTCAACAAGTAGGATTTTTCCAA 72596 |||||| |||||||||||| | || || ||| | ||| || | ||| ||| | ||||| Sbjct 345 CATATGTTGAGGTCTTTCAGCAATTTTTCCATTGAGTTTTAAAAGGTAAGATCTCTCCAA 286 Query 72597 AGT 72599 || Sbjct 285 TGT 283 >seq157723 Length=4480 Score = 123 bits (136), Expect = 3e-23 Identities = 200/286 (70%), Gaps = 4/286 (1%) Strand=Plus/Plus Query 42238 ATGTATCCACTTTTGAGCCCAATCGGCCTTCTTTTTTACACAAGGCATCGTTTCTATGGC 42297 || |||||| | | ||||||||| || ||||| | |||||||| | || ||||| Sbjct 3007 ATTTATCCAATCTAAAGCCCAATCTGCTTTCTTCCTAACACAAGGGAGATGCTCAATGGC 3066 Query 42298 ATTAAAGAGATAGtttttttCATTACTATCT--TTAACATATGTATCGATCAAAAGACTA 42355 ||| |||||| | | ||| ||| || || | |||||||| || | |||||| Sbjct 3067 ATTGAAGAGACGTTCTCGTTCC--ACTGGCTCCTTGATGTATGTATCTATGAGTAGACTA 3124 Query 42356 TACATTTCTGAATGAATGTTTTCAATGGCCATCTGAAATCCGTAGAAACATCTGGCCTCG 42415 ||||| |||||||| |||||||| || || || || || || || || || | || || Sbjct 3125 TACATCTCTGAATGGATGTTTTCCATTGCTATTTGGAAACCATAAAAGCAACGAGCTTCT 3184 Query 42416 GTAACCTGTACTTCTGTACAAAATCGTTCAGCTAAATTTTCGTTCACTATTCCGTCACTG 42475 | || ||||||||| | || | ||| | || ||||| ||||| || || |||||| Sbjct 3185 GGCACTTGTACTTCTTGTGAGAAACACTCAACCAAGTTTTCATTCACAATACCATCACTG 3244 Query 42476 GCTGCAAAAAACGCCAATACATGTTTTATAAAATATTTTTCGTCCG 42521 || ||||| || || || | ||| || |||| | |||| |||| Sbjct 3245 GCAGCAAAGAAGGCTAAGATATGAGAGATGAAATGTCTTTCATCCG 3290 Score = 113 bits (124), Expect = 6e-20 Identities = 106/135 (79%), Gaps = 0/135 (0%) Strand=Plus/Plus Query 42089 TCATCTCTACTAATTAATTCGTTGGAAAACGTGAGTCCGGGCATTAGGCCACGCTTTTTA 42148 |||||||| || || | || ||||| || || | || ||||| |||||||| || || Sbjct 2782 TCATCTCTGCTTATGAGCTCATTGGAGAAAGTTAAACCAGGCATAAGGCCACGTTTCTTC 2841 Query 42149 AGCCAAAATATAGACGCAAATGATCCAGAAAAGAAGATTCCTTCTACTGCCGCAAAGGCA 42208 |||||||| ||||| ||||||||||| || |||||||| ||||| || || ||||| || Sbjct 2842 AGCCAAAAGATAGATGCAAATGATCCTGAGAAGAAGATGCCTTCAACAGCAGCAAAAGCT 2901 Query 42209 ATAAGTCTCTCTCCA 42223 | || |||||| ||| Sbjct 2902 ACAATTCTCTCACCA 2916 Score = 86.0 bits (94), Expect = 8e-12 Identities = 141/203 (69%), Gaps = 8/203 (4%) Strand=Plus/Plus Query 41894 AATCTATCTGCGATGAATTCTATATATGTTTTCATCATTTCACAATTCATTCCTATAAGT 41953 |||||||| || | ||||| || || | |||||| ||||| ||||| || || || Sbjct 2499 AATCTATCAGCAACAAATTCAATGTAAACTCTCATCAAATCACAGTTCATGCCAATGAGC 2558 Query 41954 TTAACTGGAAGAGCCACAGTAAGAAATTCTTGTTCAATAGAGACCGCGTCTGTTATAATA 42013 ||||||||||| | || | |||||||||||||| || || || || | Sbjct 2559 CGCACTGGAAGAGCGTCTGTTAAGAATTCTTGTTCAATCTTCACAGCATC----ATCAAT 2614 Query 42014 GATC----TTACTGTTTCTTCACTCGGTGGATACAATAAATGTTTAAACATCAAACATGC 42069 |||| ||||| | |||||| ||| || | |||||||| ||||||| || || Sbjct 2615 GATCTTCTTTACTTTCTCTTCAGATGGTTTATTCTTCAAATGTTTGTACATCAAGCAAGC 2674 Query 42070 GAAATCGCAGTGCAGACCCTCAT 42092 ||||| ||||| ||||||| || Sbjct 2675 AAAATCACAGTGGAGACCCTGAT 2697 >seq164270 Length=4554 Score = 86.0 bits (94), Expect = 8e-12 Identities = 125/173 (72%), Gaps = 4/173 (2%) Strand=Plus/Minus Query 70868 TCCATCCGTAAAAATGCATACTCGTTAGTTTGGAATAGCTAGGATCGGCTATGTGAATAT 70927 |||| || ||||||||||||||||| | || ||| | || || ||||||| || Sbjct 631 TCCAACCATAAAAATGCATACTCGTCAACTTTCCATAATTCACGTCAGCCATGTGAACAT 572 Query 70928 TCATCGACTGACTTTGATCGATGAAGGCTCCCCTGTCTGCAGCCATTTTTATGATCGTCT 70987 | | |||||||| || || || ||||||| ||||| || ||||| | || | ||| Sbjct 571 TGAATGACTGACTCTGGTCAATATAGGCTCCTCTGTCAGCTGCCATGTCAATCAA--TCT 514 Query 70988 TTTGTG-GA-ATTTCCCAAATAGTTTTATAAACTCGCTTAATATCTTCTGGAA 71038 ||| || || |||||||| | ||||||||||| ||| | ||| || |||| Sbjct 513 TTTCTGAGATATTTCCCATACAGTTTTATAAAGCTTCTTCAAATCATCAGGAA 461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 669704195330280