Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_005906.1 Length=81755 Score E Sequences producing significant alignments: (Bits) Value seq87669 86.0 3e-12 seq51886 82.4 4e-11 >seq87669 Length=430 Score = 86.0 bits (94), Expect = 3e-12 Identities = 52/56 (93%), Gaps = 0/56 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAA 11523 |||| ||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct 351 GGATTGAACCCACGACCTTCGCGTTATTAGCACGACGCTCTGACCAACTGAGCTAA 296 >seq51886 Length=548 Score = 82.4 bits (90), Expect = 4e-11 Identities = 55/62 (89%), Gaps = 0/62 (0%) Strand=Plus/Minus Query 11468 GGATCGAACCTTCGACCTTCGCGTTATTAGCACGACGCTCTRACCAACTGAGCTAATGGG 11527 |||| ||||| |||||||||||||||||||||||||||| |||||||||||||| || Sbjct 353 GGATTGAACCCATGACCTTCGCGTTATTAGCACGACGCTCTGACCAACTGAGCTAACTGG 294 Query 11528 CC 11529 || Sbjct 293 CC 292 Lambda K H 0.641 0.410 0.925 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 260946067089028