Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_006639.1 Length=24748 Score E Sequences producing significant alignments: (Bits) Value seq49191 187 4e-43 seq19649 185 1e-42 seq47484 179 6e-41 seq88036 118 2e-22 seq88035 116 6e-22 seq121740 100 4e-17 >seq49191 Length=6551 Score = 187 bits (206), Expect = 4e-43 Identities = 209/277 (75%), Gaps = 2/277 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 |||||| |||||||| | | |||| || ||||| |||||||| ||||| || ||||| | Sbjct 439 CGCTAAACGTCATCGTAAAA-TCTTACGTGATAATATCCAAGGTATCACTAAACCAGCCA 497 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| ||||| ||||| || || || ||| ||||||| || |||| ||||| | Sbjct 498 TCCGTCGTCTAGCTCGCCGTGGCGGTGTGAAACGTATCTCTGGTTTAATCTACGAAGAAA 557 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||||| ||| | || | ||||| ||| || |||| ||||||| | ||| |||| Sbjct 558 CTCGTGGTGTCCTCAAAGTTTTCCTGGAGAATGTCATCCGTGATGCTGTTACCTACACCG 617 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| ||| | ||||||||||| | ||||| | |||||||| ||||| | |||| Sbjct 618 AGCACGCCAAAAGAAAGACTGTCACAGCTATGGACGTTGTCTATGCTTTGAAGAGACAAG 677 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAATCTTCTAA 16707 || | | | ||||| ||||| ||||| ||| || Sbjct 678 GCAGAACCCTCTATGGCTTTGGTGGTTAACTTTCCAA 714 >seq19649 Length=1156 Score = 185 bits (204), Expect = 1e-42 Identities = 204/269 (76%), Gaps = 2/269 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 ||| || |||||||| | | |||| || ||||| |||||||| || ||||| || |||| Sbjct 836 CGCCAAACGTCATCGTAAAA-TCTTACGTGATAATATCCAAGGCATAACCAAACCCGCTA 894 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||| |||||||||||||||||||| ||||| ||| ||||||| | |||||||||| | Sbjct 895 TCCGCCGTCTGGCTCGTCGTGGTGGTGTCAAACGTATCTCTGGTCTAATCTATGAAGAAA 954 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 ||||| ||| | || | || || ||| || |||| ||||||| | ||| |||| Sbjct 955 CTCGTGGTGTGCTCAAAGTTTTTCTTGAGAATGTCATCCGTGATGCTGTTACCTACACCG 1014 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| ||| | ||||| ||||| | ||||| | || ||||| |||| | |||| Sbjct 1015 AGCACGCCAAAAGAAAGACAGTCACAGCTATGGACGTTGTTTATGCTCTGAAGAGACAAG 1074 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTAA 16699 |||| | | ||||||||||| ||||| Sbjct 1075 GCCGAACCCTGTATGGTTTTGGTGGTTAA 1103 >seq47484 Length=1154 Score = 179 bits (198), Expect = 6e-41 Identities = 202/268 (75%), Gaps = 2/268 (1%) Strand=Plus/Plus Query 16432 CGCTAAGCGTCATCGCAGATCTCTT-CGAGATAACATCCAAGGAATCACCAAGCCAGCTA 16490 |||||| |||||||| | | |||| || ||||| |||||||| ||||| || ||||| | Sbjct 277 CGCTAAACGTCATCGTAAAA-TCTTACGTGATAATATCCAAGGTATCACTAAACCAGCCA 335 Query 16491 TCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGA 16550 |||||||||| ||||||||||| || || || ||| ||||||| || |||| ||||| | Sbjct 336 TCCGTCGTCTAGCTCGTCGTGGCGGTGTGAAACGTATCTCTGGTTTAATCTACGAAGAAA 395 Query 16551 TTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCG 16610 || | ||| | || | ||||| ||| || || | ||||||| | ||| |||| Sbjct 396 CCCGCGGTGTCCTCAAAGTTTTCCTTGAGAATGTCATTCGTGATGCTGTTACCTACACCG 455 Query 16611 AGCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAG 16670 ||||||| ||| | |||||||| || | ||||| | |||||||| |||||| | |||| Sbjct 456 AGCACGCCAAAAGAAAGACTGTGACAGCTATGGACGTTGTCTATGCTTTGAAAAGACAAG 515 Query 16671 GCCGTAAGATTTATGGTTTTGGAAGTTA 16698 || | | | ||||||||||| |||| Sbjct 516 GCAGAACCCTCTATGGTTTTGGTGGTTA 543 >seq88036 Length=965 Score = 118 bits (130), Expect = 2e-22 Identities = 146/200 (73%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 16500 TGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATG 16559 ||||||||||||| || || || ||| ||||||| || |||| ||||| | |||| || Sbjct 2 TGGCTCGTCGTGGCGGTGTGAAACGTATCTCTGGTCTGATCTACGAAGAAACACGTGGTG 61 Query 16560 TTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTA 16619 | |||| ||||||| ||| || |||| |||||| | ||| ||||||||||| | Sbjct 62 TCCTGAAAGTCTTCCTTGAGAATGTCATCCGTGATGCAGTTACCTACACCGAGCACGCCA 121 Query 16620 AACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGA 16679 || | |||||||| ||| ||||||| |||| || || |||| | || || |||| Sbjct 122 AAAGAAAGACTGTGACCGCCATGGACGTCGTGTACGCCCTGAAGAGACAGGGACGTACTC 181 Query 16680 TTTATGGTTTTGGAAGTTAA 16699 | || || || || ||||| Sbjct 182 TCTACGGCTTCGGGGGTTAA 201 >seq88035 Length=1032 Score = 116 bits (128), Expect = 6e-22 Identities = 132/177 (75%), Gaps = 0/177 (0%) Strand=Plus/Plus Query 16500 TGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATG 16559 ||||||||||||| || || || ||| ||||||| || |||| ||||| | |||| || Sbjct 2 TGGCTCGTCGTGGCGGTGTGAAACGTATCTCTGGTCTGATCTACGAAGAAACACGTGGTG 61 Query 16560 TTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTA 16619 | | || ||||||| ||| || |||| |||||| | ||| ||||||||||| | Sbjct 62 TCCTCAAAGTCTTCCTTGAGAATGTCATCCGTGATGCAGTTACCTACACCGAGCACGCCA 121 Query 16620 AACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTA 16676 || | |||||||| ||| ||||||| |||| || || |||| | ||||| |||| Sbjct 122 AAAGAAAGACTGTGACCGCCATGGACGTCGTGTACGCCCTGAAGAGACAAGGACGTA 178 >seq121740 Length=689 Score = 100 bits (110), Expect = 4e-17 Identities = 141/198 (71%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 16502 GCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTT 16561 ||||||||||| || || || ||| |||| || | |||| ||||| | ||| | |||| Sbjct 1 GCTCGTCGTGGCGGCGTGAAACGTATCTCCGGTCTCATCTACGAAGAAACTCGCGGTGTT 60 Query 16562 TTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAA 16621 |||| | |||||| | | ||||||| ||||||| || || || |||||||| || Sbjct 61 CTGAAAGTTTTCCTCGAAAATGTTATCCGTGATGCTGTCACTTACACTGAGCACGCGAAG 120 Query 16622 CGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATT 16681 | || ||||| ||| | |||||| | || || || ||||| | ||||| | | | Sbjct 121 AGAAAAACTGTAACCGCTATGGATGTGGTGTACGCTTTGAAGAGACAAGGAAGAACCCTA 180 Query 16682 TATGGTTTTGGAAGTTAA 16699 || ||||| || ||||| Sbjct 181 TACGGTTTCGGTGGTTAA 198 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 78918805044729