Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq157723 98.7 3e-15 seq9130 95.1 3e-14 >seq157723 Length=4480 Score = 98.7 bits (108), Expect = 3e-15 Identities = 93/119 (78%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 22501 GCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTTTGGCTa 22560 || ||||||| ||||||||||| ||||| || ||| ||||| | ||||||||||| Sbjct 2900 GCTTTTGCTGCTGTTGAAGGCATCTTCTTCTCAGGATCATTTGCATCTATCTTTTGGCTG 2841 Query 22561 aaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGAGATGA 22619 || ||||||| ||||||| ||| |||| || || |||||| | || ||| ||||||| Sbjct 2840 AAGAAACGTGGCCTTATGCCTGGTTTAACTTTCTCCAATGAGCTCATAAGCAGAGATGA 2782 >seq9130 Length=4418 Score = 95.1 bits (104), Expect = 3e-14 Identities = 164/232 (71%), Gaps = 15/232 (6%) Strand=Plus/Minus Query 18989 ATGGATATTTTGTATCCAGAATGTTTGAATTTTTCTCTTTTTTACCCCACGGGAAATCAT 19048 |||||||||| |||||||| |||| | | | |||| | |||||| || ||||||| Sbjct 2283 ATGGATATTTCGTATCCAG-----TTGACTATCTGCCTTTCT-ACCCCATGGTAAATCAT 2230 Query 19049 CGTCGTTACACCCGCGTGGCATGCCGTTATAACCAATTGATATAATTTTATT-TGTCTTT 19107 | ||| | || | | |||||||| ||||||||||| || ||||| || || || Sbjct 2229 CATCGCTGCAACGGTTCGGCATGCCATTATAACCAATACCTACTATTTTCTTCTG---TT 2173 Query 19108 GATTCAATAATACAAGAACCAACCTGTGTGCTTGGATCTTTTGATCGCATT--GCTGATA 19165 ||| || |||||||| ||||| |||||||| |||||||| | || || || || | Sbjct 2172 CATT-AACAATACAAGCGCCAACTTGTGTGCTAGGATCTTT--ACTGCGTTGCGCAGACA 2116 Query 19166 ATTTCGCAACACCCATAAAATACTGATCCCAACTTATATAATCCGCGCGTTT 19217 || ||| |||||||||| | ||||| || ||| || | ||||| Sbjct 2115 GAAATGCGACAGCCATAAAATAATCTTCCCAGGATAAATAGTCAGACCGTTT 2064 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1300497148663446