Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq157723 141 1e-28 >seq157723 Length=4480 Score = 141 bits (156), Expect = 1e-28 Identities = 198/278 (71%), Gaps = 0/278 (0%) Strand=Plus/Plus Query 93272 ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAGGTAGTGTTTCGATAGCGTTA 93331 ||||| | |||||||||||| ||||| ||| ||| |||||| || || || || || Sbjct 3011 ATCCAATCTAAAGCCCAATCTGCTTTCTTCCTAACACAAGGGAGATGCTCAATGGCATTG 3070 Query 93332 AATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTATCGATTAACAGAGAATACATT 93391 || || ||||| || | | || ||||||||||| || | ||| |||||| Sbjct 3071 AAGAGACGTTCTCGTTCCACTGGCTCCTTGATGTATGTATCTATGAGTAGACTATACATC 3130 Query 93392 TCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAGCTTCCGTGATC 93451 || ||||||| || |||||||| |||||||| || || || || | |||||| | | Sbjct 3131 TCTGAATGGATGTTTTCCATTGCTATTTGGAAACCATAAAAGCAACGAGCTTCTGGCACT 3190 Query 93452 TGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATCGGATGCTGCa 93511 || |||||||| || || | ||| || | |||||||| || |||||||| || ||| Sbjct 3191 TGTACTTCTTGTGAGAAACACTCAACCAAGTTTTCATTCACAATACCATCACTGGCAGCA 3250 Query 93512 aaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATC 93549 || || || || ||||| || |||||| | ||||| Sbjct 3251 AAGAAGGCTAAGATATGAGAGATGAAATGTCTTTCATC 3288 Score = 87.8 bits (96), Expect = 2e-12 Identities = 137/188 (73%), Gaps = 6/188 (3%) Strand=Plus/Plus Query 92918 AATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATCACAATTCATTCCTAGA 92977 |||||||||||||| |||||||| ||||| |||||||||||| ||||| || | Sbjct 2496 AATAATCTATCAGCAACAAATTCAATGTAAACTCTCATCAAATCACAGTTCATGCCAATG 2555 Query 92978 AGACGTACAGGTAGAGCGTCGGTCAAGAAATCTTTCTCGATTACAACGGCTTCTTTCAAG 93037 || || || || |||||||| || ||||| |||| || || || || || | | | Sbjct 2556 AGCCGCACTGGAAGAGCGTCTGTTAAGAATTCTTGTTCAATCTTCACAGCATCATCAATG 2615 Query 93038 AT-TTCTATTACTCTACTATT-TGGTGGTTT-TTGTACGACATAATTGTACATTAAGCAC 93094 || |||| ||||| | || || | |||||| || | | | || |||||||| ||||| Sbjct 2616 ATCTTCT-TTACT-TTCTCTTCAGATGGTTTATTCTTC-AAATGTTTGTACATCAAGCAA 2672 Query 93095 GCAAAGTC 93102 ||||| || Sbjct 2673 GCAAAATC 2680 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 555670141119720