Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_008724.1 Length=288047 Score E Sequences producing significant alignments: (Bits) Value seq109567 167 4e-36 >seq109567 Length=8344 Score = 167 bits (184), Expect = 4e-36 Identities = 179/237 (76%), Gaps = 0/237 (0%) Strand=Plus/Minus Query 68225 ATTTTAATTTCCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTT 68284 || ||| ||||| || ||||| || | |||||||| || ||||| ||||| || ||||| Sbjct 5800 ATGTTAGTTTCCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTCTGAATGTT 5741 Query 68285 ATAATCGGAGAGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTG 68344 ||||| || || || | |||||||| | ||||| || || || ||||| | |||||| Sbjct 5740 GTAATCAGACAGGGTTCGGCCATCTTCCAGTTGCTTGCCTGCAAAGATGAGACGTTGTTG 5681 Query 68345 GTCGGGTGGAATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGC 68404 ||| ||||| || ||||| ||||||||||| || | || || ||| |||||||| Sbjct 5680 GTCTGGTGGGATCCCTTCTTTGTCTTGAATTTTGGTTTTCACATTCTCAATGGTGTCGCT 5621 Query 68405 TGATTCTACTTCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || ||| ||||| | ||| || ||||| || || ||||| || || || |||||||| Sbjct 5620 TGCTTCCACTTCTAGGGTTATTGTTTTGCCAGTCAGGGTTTTCACAAAAATCTGCAT 5564 Score = 125 bits (138), Expect = 1e-23 Identities = 164/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || |||||||| || | |||||||| || || || ||||| || ||||| || || Sbjct 4878 CCACCGCGAAGACGAAGAACCAAGTGAAGGGTTGATTCTTTCTGTATGTTGTAGTCACTC 4819 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | || || || ||||| ||||| | ||||||||| || || Sbjct 4818 AAAGTTCGGCCATCTTCGAGTTGTTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGCGGG 4759 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||| |||||||||||||| | ||| || |||||| || || | ||| || Sbjct 4758 ATGCCTTCTTTGTCTTGAATCTTCGTCTTTACATTCTCGATAGTATCACTGGGTTCAACC 4699 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | |||||| || || || || | ||| || || || || ||||| Sbjct 4698 TCAAGGGTGATAGTCTTGCCAGTTAAGGTTTTCACAAAGATTTGCAT 4652 Score = 122 bits (134), Expect = 2e-22 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||||| || || || || || || ||||| || || || || Sbjct 5562 CCACCACGTAGACGTAGAACCAAATGAAGGGTTGATTCCTTCTGGATATTGTAGTCAGAC 5503 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | ||||| || || || ||||| | |||||| || ||||| Sbjct 5502 AAGGTTCGACCATCTTCCAGTTGCTTGCCTGCAAAGATGAGACGTTGTTGATCTGGTGGG 5443 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 || ||||| |||||||||||||||| ||| || ||| || ||||| || || || Sbjct 5442 ATTCCTTCTTTGTCTTGAATCTTTGTCTTCACATTCTCAATTGTGTCGCTTGCCTCAACC 5383 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||| || ||||| || || | ||| || || || |||||||| Sbjct 5382 TCAAGGGTAATAGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 5336 Score = 116 bits (128), Expect = 7e-21 Identities = 162/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 68235 CCTCCGCGAAGGCGCAATACCAAGTGTAGCGTGGACTCTTTTTGGATGTTATAATCGGAG 68294 || || || || || | ||||| || || || || ||||| ||||| || || || || Sbjct 5106 CCACCACGTAGACGTAGAACCAAATGAAGGGTTGATTCTTTCTGGATATTGTAGTCAGAC 5047 Query 68295 AGTGTCCTCCCATCTTCTAACTGCTTCCCGGCGAATATGAGTCTTTGTTGGTCGGGTGGA 68354 | || | |||||||| | || || || ||||| ||||| | |||||| || || || Sbjct 5046 AAGGTTCGGCCATCTTCCAGTTGTTTGCCAGCGAAAATGAGACGTTGTTGATCTGGCGGG 4987 Query 68355 ATGCCTTCCTTGTCTTGAATCTTTGCCTTGACGGCCTCGATGGTGTCTGCTGATTCTACT 68414 |||||||| ||||||||||| || | ||| || || || ||||| || || ||| Sbjct 4986 ATGCCTTCTTTGTCTTGAATTTTCGTCTTTACATTTTCAATCGTGTCGCTTGGCTCAACT 4927 Query 68415 TCCAAGGTGATGGTTTTTCCCGTGAGGGTCTTGACGAATATCTGCAT 68461 || | ||||| || || || || | ||| || ||||| |||||||| Sbjct 4926 TCTAGAGTGATCGTCTTGCCAGTCAAGGTTTTCACGAAAATCTGCAT 4880 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 919651821545160