Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_010276.1 Length=156179 Score E Sequences producing significant alignments: (Bits) Value seq109567 132 5e-26 >seq109567 Length=8344 Score = 132 bits (146), Expect = 5e-26 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 64241 TGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCTTCAAGCTGC 64300 |||| || |||||||| |||||||||||||| | | ||| || | ||||| || ||| Sbjct 5766 TGAAGAGTGGATTCTTTCTGAATGTTGTAATCAGACAGGGTTCGGCCATCTTCCAGTTGC 5707 Query 64301 TTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCTTGTATTTTT 64360 ||||| ||| | ||||| || || ||||| || || || |||||||| ||||| ||||| Sbjct 5706 TTGCCTGCAAAGATGAGACGTTGTTGGTCTGGTGGGATCCCTTCTTTGTCTTGAATTTTG 5647 Query 64361 TGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTCTTGCCGGTC 64420 || ||| ||| | || || | || |||||||||| |||| || ||||| ||| Sbjct 5646 GTTTTCACATTCTCAATGGTGTCGCTTGCTTCCACTTCTAGGGTTATTGTTTTGCCAGTC 5587 Query 64421 AAAGTTTTTACGAAAATTTGCAT 64443 | ||||| || ||||| ||||| Sbjct 5586 AGGGTTTTCACAAAAATCTGCAT 5564 Score = 125 bits (138), Expect = 7e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || | ||||| ||||||||||| || || ||||| || | | ||| || | ||| Sbjct 5319 AGAACCAAATGAAGGGTCGATTCTTTCTGGATATTGTAGTCAGACAAGGTTCGACCATCT 5260 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || || ||||| || ||||||| ||||| ||||| || || || |||||||| ||| Sbjct 5259 TCCAGTTGTTTGCCAGCGAAAATGAGACGCTGTTGGTCTGGCGGGATGCCTTCTTTATCT 5200 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || ||||| ||| || || | || || | | || ||||||| ||| | ||| Sbjct 5199 TGAATTTTCGTCTTCACGTTTTCAATCGTGTCGCTTGGCTCAACTTCTAGAGTGATCGTC 5140 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 ||||| ||||| ||||| |||||||| ||||| Sbjct 5139 TTGCCAGTCAAGGTTTTCACGAAAATCTGCAT 5108 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 64232 AGCACTAGATGAATCGTCGATTCTTTTTGAATGTTGTAATCTGCGACGGTGCGCGCGTCT 64291 || || | ||||| || ||||| || || || ||||| || | | ||| || | ||| Sbjct 5547 AGAACCAAATGAAGGGTTGATTCCTTCTGGATATTGTAGTCAGACAAGGTTCGACCATCT 5488 Query 64292 TCAAGCTGCTTGCCGGCATAAATGAGCCGCTGCTGGTCGGGAGGAATTCCTTCTTTTTCT 64351 || || |||||||| ||| | ||||| || || || || || || ||||||||||| ||| Sbjct 5487 TCCAGTTGCTTGCCTGCAAAGATGAGACGTTGTTGATCTGGTGGGATTCCTTCTTTGTCT 5428 Query 64352 TGTATTTTTTGCTTTACAACCTCCACTGTATCACCGGCGTCCACTTCTACAGTTACGGTC 64411 || || ||| ||| ||| ||| | ||| || | || || || || | || | || Sbjct 5427 TGAATCTTTGTCTTCACATTCTCAATTGTGTCGCTTGCCTCAACCTCAAGGGTAATAGTT 5368 Query 64412 TTGCCGGTCAAAGTTTTTACGAAAATTTGCAT 64443 || || ||||| ||||| || ||||| ||||| Sbjct 5367 TTACCAGTCAAGGTTTTCACAAAAATCTGCAT 5336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 498576478225320