Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq109567 125 7e-24 >seq109567 Length=8344 Score = 125 bits (138), Expect = 7e-24 Identities = 163/219 (74%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| ||||| | || ||||| || ||||| | || || ||| | | | Sbjct 5108 ATGCAGATTTTCGTGAAAACCTTGACTGGCAAGACGATCACTCTAGAAGTTGAGCCAAGC 5167 Query 38304 GACA-GCGTGCAAACGCTTAAAGAA-AAAATCCTCGACAAAGAGGGAATTCCCGCC-GAC 38360 |||| | || ||||| | |||| ||||| | || ||||| || || |||||| ||| Sbjct 5168 GACACGATTGAAAACG--TGAAGACGAAAATTCAAGATAAAGAAGGCAT-CCCGCCAGAC 5224 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 |||||||| ||||||| ||| |||||||| ||||| || | || ||| | |||||| Sbjct 5225 CAACAGCGTCTCATTTTCGCTGGCAAACAACTGGAAGATGGTCGAACCTTGTCTGACTAC 5284 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || ||||| || ||| |||| || |||||||| || ||| Sbjct 5285 AATATCCAGAAAGAATCGACCCTTCATTTGGTTCTACGT 5323 Score = 89.7 bits (98), Expect = 5e-13 Identities = 155/219 (71%), Gaps = 6/219 (3%) Strand=Plus/Plus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 |||||||| || || ||||| | || ||||| || |||||| | || || || ||| Sbjct 4652 ATGCAAATCTTTGTGAAAACCTTAACTGGCAAGACTATCACCCTTGAGGTTGAACCCAGT 4711 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAA-ATCCTCGACAAAGAGGGAATTCCCGCC-GAC 38360 || | | | || | |||||| || || | |||||||| || || |||||| ||| Sbjct 4712 GATACTATCGAGAATG--TAAAGACGAAGATTCAAGACAAAGAAGGCAT-CCCGCCAGAC 4768 Query 38361 CAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTAC 38420 ||||| || ||||| | ||| |||||||| || || || | || || | | |||||| Sbjct 4769 CAACAACGTCTCATCTTCGCTGGCAAACAACTCGAAGATGGCCGAACTTTGAGTGACTAC 4828 Query 38421 AACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 ||||| || || ||| | || || || ||||| || ||| Sbjct 4829 AACATACAGAAAGAATCAACCCTTCACTTGGTTCTTCGT 4867 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 499103349275520