Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_014649.1 Length=1181549 Score E Sequences producing significant alignments: (Bits) Value seq919 293 2e-73 seq154533 239 3e-57 seq30695 159 3e-33 seq50382 127 2e-23 seq102206 123 2e-22 seq920 123 2e-22 seq51076 113 3e-19 seq913 96.9 3e-14 >seq919 Length=2745 Score = 293 bits (324), Expect = 2e-73 Identities = 728/1093 (67%), Gaps = 28/1093 (3%) Strand=Plus/Plus Query 517163 GCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATA 517222 ||||| ||| ||| | ||||| | ||||| ||| |||||||| || ||| ||||| Sbjct 94 GCTTCATTAACCATACGATCAATATCATCTTTAGATAATCTTCCTTTATCATTTGTAATG 153 Query 517223 GTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTG 517282 || || || || ||| || || |||| ||| ||||||| | ||||||||| Sbjct 154 GTGATCTTGTTTTCTTTACCAGTACTCTTCTCAGTTGCATTCACATTTAAAATACCATTA 213 Query 517283 GCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCT 517342 || || | |||||| ||||| |||||||||||||| || | ||||||| || || || Sbjct 214 GCGTCAATATCAAAGGTGACATCAATTTGAGGGACTCCACGTGGAGCAGGAGGAATACCA 273 Query 517343 TCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAA 517402 || | ||| | || ||| ||||||||| || || | | ||||||||| || || Sbjct 274 GATAACTCAAACTTACCAAGAAGATTATTATCCTTGGTCATTGCTCGTTCACCTTCAAAT 333 Query 517403 ATTTGGAT-AGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACTCTGGATTTTTT 517461 | |||||| ||| || ||| ||| ||||| || |||||||| ||| | | || || Sbjct 334 ACTTGGATGAGT-ACACCAGGTTGGTTATCAGAGTAAGTTGTGAATGTTTGCGTCTTCTT 392 Query 517462 ACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCTGCTGTTTCTAA 517521 || | ||||| ||||| ||||| ||||||| ||||| ||||| || || Sbjct 393 TGTTGGTACAGTTGTATTTCTTGGGATAATCGCTGTCATAACTCCACCAGCTGTCTCCAA 452 Query 517522 ACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTG 517581 ||||||||| | ||||||||||||| || || ||| | || || || ||| |||| Sbjct 453 ACCAAGAGATAATGGAGTGACATCAAGTAAGAGAATGTCTTTAA---CATCCTCACTTTG 509 Query 517582 A---CCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTCATCAGGATT 517638 | || |||||||| ||||| | ||| |||||||| ||||||||||| || ||||| Sbjct 510 ATCTCCTGACAGAATAGCAGCTTGTACAGCTGCACCATAAGCAACAGCTTCGTCGGGATT 569 Query 517639 AACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGTTGTCT-TACCTTAG 517697 | || | || |||| ||||| || || | | || | || ||| | ||||| Sbjct 570 GATAGACTTGTTCAGTTCTTTACAGCCAAAGAACTCTTTCAGCAATT-TCTGGATCTTAG 628 Query 517698 GAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTTATCCAGTTTTG 517757 | ||||| | || || ||||| | |||| ||||| || | ||| ||||||| Sbjct 629 GTATACGGGTGGAGCCACCAACCAGAACAACTTCATCAACTTTATCTTTGGAGAGTTTTG 688 Query 517758 AATCCAATAAAACTTTTTCAACGGGTTCAAGACCCGCTCTAAACAAGTCTGAACAAAGTT 517817 ||| ||| |||| ||||| ||||| | || | || | || ||| |||| Sbjct 689 CATCTTTCAAAGCTTTCTCAACTGGTTCCAATGTACCTTTGAAGAGATCACCACAGAGTT 748 Query 517818 CTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTTCGAACAAAGAATCAA 517877 |||| ||| | ||||| || | | || ||||||| ||||| ||||| ||||| | Sbjct 749 CTTCAAATCTTGCTCTTGTGATCGATGTATAGAAATCAATGCCTTCAAACAATGAATCGA 808 Query 517878 CTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCACGTTTAGCACGTTCACATGCTGT-- 517935 ||||| || | ||||| || || || | | || || |||||||| || || Sbjct 809 TCTCAATGGTCGCTTGAGCACTGGATGACAGGGTTCTCTTTGCTCGTTCACAAGCGGTTA 868 Query 517936 CCTTAGTCTTCGTA--AGGCTTTTGCTGATTGATTCAAATCTGTTTTATATTTTCTCTTG 517993 | || || || | |||| | | | ||| |||| | || | ||| || ||| Sbjct 869 ACAACCTCCTCATAGCACGCTTGTTC----CCACTCAGATCTTTCTTGTTTTTCCTTTTG 924 Query 517994 AAATCTTCAACACACCATGTTACAAGACGATT--ATCAAAATCTTCACCTCCCAATTTAG 518051 || |||| ||| | ||| | | | | || ||||||||||| ||| || | | || Sbjct 925 AACTCTT-TACAGA-AATGCTCGACCAAGTTTTGATCAAAATCTTGACCACCAAGATGAG 982 Query 518052 TATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACAAAAGAGTTACAT 518111 ||| || || || | | |||| || | ||| || | | | || | ||||| Sbjct 983 TATCACCGGAGGTCGACTTCACTTCAAAGATGCCAGAATCGATTGCTAGAACGGATACAT 1042 Query 518112 CATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTG------TCTTGGT 518165 || || || ||||| | |||||| || || |||| ||||||| || | Sbjct 1043 CAAAAGTACCTCCACCAAGATCAAAGATGAGAACATGTTCTTCTTTGCCCATCCCTCCTT 1102 Query 518166 TTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACAT 518225 ||||||| | |||||| |||| ||||||||| || || ||||| ||||| | | |||| Sbjct 1103 TTTTATCCAAACCATAAGCAATAGCAGCAGCTGTCGGCTCATTGATAATACGAAGGACAT 1162 Query 518226 TAAGACCAGCAAT 518238 | | ||||||| Sbjct 1163 TCAATGCAGCAAT 1175 >seq154533 Length=1439 Score = 239 bits (264), Expect = 3e-57 Identities = 508/749 (68%), Gaps = 12/749 (2%) Strand=Plus/Plus Query 517496 GTCATAATACCACCTGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACA 517555 ||||||| ||||| ||||| || ||||||||||| | |||||||| || | || | Sbjct 16 GTCATAACTCCACCAGCTGTCTCCAAACCAAGAGATAATGGAGTGACGTCTATGAGAAGG 75 Query 517556 ATATTTTGAAGTTTTTCATCAGTTTGACCAACA---AGAATAGCTGCTTGAATAGCAGCA 517612 |||| || | || |||| ||||| | | |||||||| ||||| | || ||| Sbjct 76 ATATCTTTCACTTGTTCAC---TTTGATCTCCTGACAGAATAGCAGCTTGTACGGCTGCA 132 Query 517613 CCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAA 517672 ||||| |||||||||||||| ||||| | || | || |||| |||||||||||| ||| Sbjct 133 CCATAAGCAACAGCTTCATCGGGATTGATAGACTTGTTCAGTTCTTTACCATTGAAGAAA 192 Query 517673 TTTGAAAGAAGTTGTCT-TACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTC 517731 | | || | || ||| | |||||| ||||| | || || ||||| | |||||||| Sbjct 193 TCTTTCAGCAATT-TCTGGATCTTAGGTATACGGGTGGAGCCACCAACCAGAACAATTTC 251 Query 517732 ATGCACCTGTGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACC 517791 || | | ||| ||||| | ||| ||| |||| ||||| ||||| | | Sbjct 252 ATTGATTTTATCTTTGGAGAGTTTGGCATCTTTCAAAGCTTTCTCAACTGGTTCCAAAGT 311 Query 517792 CGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATA 517851 || | |||| || ||| |||||||| ||| | ||||| || | || || | Sbjct 312 GCCTTTCAACAGATCACCACAGAGTTCTTCAAATCTTGCTCTTGTGATGGTTGTATAGAA 371 Query 517852 ATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGC 517911 |||||| ||||| ||||| ||||||| ||||| | | ||| | | |||| | Sbjct 372 ATCAATGCCTTCAAACAAGGAATCAATCTCAATACTTGCTTGGTTGCTTGTTGATAAGGT 431 Query 517912 ACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGAT-TCA 517970 | || || ||||||||||||||| | ||||| | ||| | | ||||| | | Sbjct 432 TCTCTTTGCTCGTTCACATGCTGTCAACAATCTTCTCATTGCTCGT-TTATTTGATGTGA 490 Query 517971 AATCTGTTTTATATTTTCTCTTGAAATCTTCA-ACACACCATGTTACAAGACGATTATCA 518029 ||| | |||| |||||| || |||| | | | | || ||| | | |||| Sbjct 491 TGTCTTTCTTATTCTTTCTCACAAACTCTTTACAGAAATGAT-CTACCATTTTCTGATCA 549 Query 518030 AAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCT 518089 ||||||| ||| || | | ||||| || | || | | |||| || | || ||| Sbjct 550 AAATCTTGACCACCAAGATGAGTATCACCAGCTGTTGACTTCACTTCAAAGATGCCTTCT 609 Query 518090 TCAAGAGACAAAAGAGTTACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTC 518149 |||| | || | || |||||| ||| ||||| || | ||||| || | |||||| Sbjct 610 TCAATTGCTAATATAGACACATCAAAGGTACCACCTCCGAGGTCAAAGATCAACACATTC 669 Query 518150 ATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTA 518209 |||| | | || || ||||| | |||||| |||| |||||| || |||||||||||| Sbjct 670 TTTTCACTAGCATGCTTCTTATCTAAACCATAAGCAATAGCAGCTGCTGTTGGTTCATTA 729 Query 518210 ATAATTCTCAAAACATTAAGACCAGCAAT 518238 ||||| | ||| ||||| | ||||| ||| Sbjct 730 ATAATACGCAAGACATTCAAACCAGAAAT 758 >seq30695 Length=4496 Score = 159 bits (176), Expect = 3e-33 Identities = 350/519 (67%), Gaps = 14/519 (3%) Strand=Plus/Minus Query 517271 AGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA 517330 |||||||||||| |||| | ||||| ||||| ||||| || || || | ||||| Sbjct 1077 AGAATACCATTGACATCGATCTCAAAGGTGACCTCAATCTGTGGTGTGCCACGTGGAGCA 1018 Query 517331 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 517390 ||||| || || || | |||| | || ||| || |||||||| || | |||| Sbjct 1017 GGTGGTATACCGGTCAGGTCAAATTTACCAAGAAGATGGTTATCTTTGGTCATGGGTCGT 958 Query 517391 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 517450 ||||| || || | ||| || || || | | || ||||||| ||||| || | | Sbjct 957 TCACCTTCAAATACTTGAATGGTCACAGTATTCTGGTTATCTGCTGCAGTTGAGAAGATT 898 Query 517451 CTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCT 517510 |||||| || || || | || | |||| | |||||||| | |||||| Sbjct 897 TGGGATTTCTTTGTTGGGATGACAGAATTACGGGCAATCAGTTTGGTCATGACACCACCA 838 Query 517511 GCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTT 517570 | ||||| | |||||||| |||||| | ||||||| || |||| | || | | Sbjct 837 ACAGTTTCAATACCAAGAGTAAGAGGGTTAACATCAAGTAACACAACTTCACCAACATCT 778 Query 517571 TCATCAGTTTGACCAA-CAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACAGCTTC 517629 || ||| ||| ||||| | | ||||| | |||||||||||||||||||||||| Sbjct 777 TCTTCA------CCACTCAAGAC-ACCAGCTTGGACAGCAGCACCATATGCAACAGCTTC 725 Query 517630 ATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATT--TGA-AAGAAGTTG 517686 |||||| || | | | || ||| |||||||| || || || ||| |||| ||| Sbjct 724 ATCAGGGTTGATACCACGACTTGGTTCTTTACCATCAAAGAATTTCTTGACAAGATCTTG 665 Query 517687 TCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGATTT 517746 | || ||||| || | || ||| || ||||| || ||||||||||| | | || ||| Sbjct 664 T---ACTTTAGGGATTCTAGTTGAACCACCAACCAAAACAATTTCATGAATATCTGTTTT 608 Query 517747 ATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTC 517785 | || | ||||| || ||||| | || ||||| Sbjct 607 CTTCAAATCAGAATCTTCCAATACTTTCTTTACTGGTTC 569 >seq50382 Length=326 Score = 127 bits (140), Expect = 2e-23 Identities = 177/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 517163 GCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATA 517222 ||||| ||| ||| | ||||| | ||||| ||| |||||||| || ||| ||||| Sbjct 79 GCTTCATTAACCATACGATCAATATCATCTTTAGATAATCTTCCTTTATCATTTGTAATT 138 Query 517223 GTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTG 517282 || || || || ||| || || |||| ||| ||||||| | ||||||||| Sbjct 139 GTGATCTTGTTTTCTTTACCAGTACTCTTCTCAGTTGCATTCACATTTAAAATACCATTA 198 Query 517283 GCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCT 517342 || || | |||||| ||||| |||||||||||||| || | ||||||| || || || Sbjct 199 GCGTCAATATCAAAGGTGACATCAATTTGAGGGACTCCACGTGGAGCAGGAGGAATACCA 258 Query 517343 TCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAA 517402 ||| | ||| | || ||| ||||||||| || || | | ||||||||| || || Sbjct 259 GACAACTCAAACTTACCAAGAAGATTATTATCCTTGGTCATTGCTCGTTCACCTTCAAAT 318 Query 517403 ATTTGGAT 517410 | |||||| Sbjct 319 ACTTGGAT 326 >seq102206 Length=3975 Score = 123 bits (136), Expect = 2e-22 Identities = 98/115 (85%), Gaps = 2/115 (2%) Strand=Plus/Minus Query 870800 ATTGTCGATTATTCTTCTCCAAATATTGCTAAAGAAATGCATATTGGACATTTAAGATCA 870859 ||||| |||| ||||||||| |||||||| |||||||||||| |||| |||||||||||| Sbjct 3089 ATTGTTGATTTTTCTTCTCCTAATATTGCCAAAGAAATGCATGTTGGTCATTTAAGATCA 3030 Query 870860 ACTATTATTGGTGAATCTATTTGTAGGGTATTAGAA-ATGTGTGGACACGATGTT 870913 || | ||||||||| ||||||| | |||| ||| |||| ||||||||||||| Sbjct 3029 ACAGTAATTGGTGAAAGTATTTGTCGTTTATTGGAATATGT-TGGACACGATGTT 2976 >seq920 Length=2663 Score = 123 bits (136), Expect = 2e-22 Identities = 176/248 (71%), Gaps = 0/248 (0%) Strand=Plus/Plus Query 517163 GCTTCTCTAATCATTCTCTCAATTTGATCTTCAGAGAATCTTCCGCGATTATTAGTAATA 517222 ||||| ||| ||| | ||||| | ||||| ||| |||||||| || ||| ||||| Sbjct 2413 GCTTCATTAACCATACGATCAATATCATCTTTAGATAATCTTCCTTTATCATTTGTAATG 2472 Query 517223 GTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAGAATACCATTG 517282 || || || || ||| || || |||| ||| ||||||| | ||||||||| Sbjct 2473 GTGATCTTGTTTTCTTTACCAGTACTCTTCTCAGTTGCATTCACATTTAAAATACCATTA 2532 Query 517283 GCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCT 517342 || || | |||||| ||||| |||||||||||||| || | ||||||| || || || Sbjct 2533 GCGTCAATATCAAAGGTGACATCAATTTGAGGGACTCCACGTGGAGCAGGAGGAATACCA 2592 Query 517343 TCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGTTCACCCTCGAAA 517402 || | ||| | || ||| ||||||||| || || | | ||||||||| || || Sbjct 2593 GATAATTCAAACTTACCAAGAAGATTATTATCCTTGGTCATTGCTCGTTCACCTTCAAAT 2652 Query 517403 ATTTGGAT 517410 | |||||| Sbjct 2653 ACTTGGAT 2660 >seq51076 Length=2317 Score = 113 bits (124), Expect = 3e-19 Identities = 134/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 518531 GTATTGGTTGGATTAATTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTC 518590 || || ||||| || || ||| || | ||| || ||||||||||||| ||| || Sbjct 81 GTGTTTGTTGGGTTCATAGCACACTGGTTTTTTGCCGCATCTCCAATCAATCTTTCAGTG 140 Query 518591 TCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCA 518650 || | || | ||||| || ||||| | || ||||| ||||| || ||||||||| Sbjct 141 TCGTTGAAGGCGACATAACTCGGCGTTGTTCTGTTCCCTTGGTCATTTGCGATAATTTCA 200 Query 518651 ACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATA 518710 ||||| |||| ||| ||||||| ||||| | | ||||| |||||||||||||||| | Sbjct 201 ACTTTGCCATGTTGAAATACACCAACACACGAATAGGTTGTACCTAAATCAATACCAACA 260 Query 518711 GC 518712 || Sbjct 261 GC 262 >seq913 Length=7837 Score = 96.9 bits (106), Expect = 3e-14 Identities = 245/367 (67%), Gaps = 17/367 (5%) Strand=Plus/Minus Query 518026 ATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCC 518085 ||| ||||| || || || || | |||| ||||| |||| | ||||| |||| |||| Sbjct 4743 ATCGAAATCATCTCCACCTAAGTGGTTATTACCTGAAGTAGATAATACTTTGAAA-GTCC 4685 Query 518086 ATCTTCAAGAGACAAAAG---AGTTACATCATGGGTTCCACCACCCATATCAAAAATAAG 518142 ||||| | || || || ||| || || || || | ||||||| | Sbjct 4684 --CTTCAGCTAATTCTAGGATAGACACGTCAAAAGTCCCTCCTCCTAGGTCAAAAACCAA 4627 Query 518143 TACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGG 518202 ||| |||| ||| | || |||||| | || || || |||||||| ||||| || Sbjct 4626 TACTTTCAATTCATGATCAAC---TTTATCGATTCCGTATGCCAAAGCAGCCGCAGTCGG 4570 Query 518203 TTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTG 518262 ||| ||||| ||||| ||| | | ||| || ||| ||||||| ||||||| || | Sbjct 4569 TTCGTTAATGATTCTTTCTACAGTTAAACCTGCTATTTTTCCTGCCACTTTAGTAGCATT 4510 Query 518263 TCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCAGTTACTTCTTTACC 518322 | ||| | ||| || ||||| |||||||| || ||||| || ||||| || || | Sbjct 4509 ACGTTGGGCATCATTGAAATAAGCAGGAACGGTTATAACAGCTCTAGTTATTTTTTCA-- 4452 Query 518323 AATATAAGCGCTTGCC-GT---TTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTT 518378 | ||| ||| | || || ||| || | || ||| || || |||||||||| Sbjct 4451 --TTTAATTTCTTTTCTGTAAATTCTTTAATATAACGTAAGATTTCTGCAGAAATTTGTT 4394 Query 518379 CTGGGGA 518385 |||| || Sbjct 4393 CTGGTGA 4387 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3772334186691418