Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq109567 172 1e-37 seq80964 95.1 3e-14 seq80965 91.5 3e-13 >seq109567 Length=8344 Score = 172 bits (190), Expect = 1e-37 Identities = 164/210 (78%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||||||||| ||||| ||||| |||||||| | || |||| |||||||| Sbjct 5773 AACCAAGTGAAGAGTGGATTCTTTCTGAATGTTGTAATCAGACAGGGTTCGGCCATCTTC 5714 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 || ||||| ||||| ||||| || |||||||||||||| || || |||||||||||||| Sbjct 5713 CAGTTGCTTGCCTGCAAAGATGAGACGTTGTTGGTCTGGTGGGATCCCTTCTTTGTCTTG 5654 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTT 195110 |||||| || || |||||||||||||| ||||||||| ||||| | || || Sbjct 5653 AATTTTGGTTTTCACATTCTCAATGGTGTCGCTTGCTTCCACTTCTAGGGTTATTGTTTT 5594 Query 195111 TCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 || |||| ||||| || || | ||||| Sbjct 5593 GCCAGTCAGGGTTTTCACAAAAATCTGCAT 5564 Score = 147 bits (162), Expect = 5e-30 Identities = 161/213 (76%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 194931 AACAAGGTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTC 194990 ||| | |||||| || || ||||| || || ||||| || | ||||| |||||||| Sbjct 4861 AACCAAGTGAAGGGTTGATTCTTTCTGTATGTTGTAGTCACTCAAAGTTCGGCCATCTTC 4802 Query 194991 GAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTG 195050 ||| || || || |||||||| || |||||||||||||| || ||||||||||||||||| Sbjct 4801 GAGTTGTTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGCGGGATGCCTTCTTTGTCTTG 4742 Query 195051 AATTTTTTGCTTGACGTTCTCAATGGTGTCCGAACT---TTCCACTTCAAGGGTAACCGT 195107 ||| || ||| || ||||| || || || ||| ||| || |||||||| | || Sbjct 4741 AATCTTCGTCTTTACATTCTCGATAGTATC---ACTGGGTTCAACCTCAAGGGTGATAGT 4685 Query 195108 CTTTCCTGTCAAAGTTTTTACGAACACTTGCAT 195140 ||| || || || ||||| || || | |||||| Sbjct 4684 CTTGCCAGTTAAGGTTTTCACAAAGATTTGCAT 4652 Score = 147 bits (162), Expect = 5e-30 Identities = 159/207 (77%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||| || || ||||| || |||||||| || | |||| |||| |||||||| || || Sbjct 5082 TGAAGGGTTGATTCTTTCTGGATATTGTAGTCAGACAAG-GTTCGGCCATCTTCCAGTTG 5024 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || ||||| || || |||||||| ||||| || ||||||||||||||||||||||| Sbjct 5023 TTTGCCAGCGAAAATGAGACGTTGTTGATCTGGCGGGATGCCTTCTTTGTCTTGAATTTT 4964 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTCTTTCC 195113 ||| || || ||||| ||||| ||| || ||||| || || | |||||| || Sbjct 4963 CGTCTTTACATTTTCAATCGTGTC---GCTTGGCTCAACTTCTAGAGTGATCGTCTTGCC 4907 Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| ||||| | ||||| Sbjct 4906 AGTCAAGGTTTTCACGAAAATCTGCAT 4880 Score = 147 bits (162), Expect = 5e-30 Identities = 159/207 (77%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||| || || ||||| || |||||||| || | |||| |||| |||||||| || || Sbjct 5310 TGAAGGGTCGATTCTTTCTGGATATTGTAGTCAGACAAG-GTTCGACCATCTTCCAGTTG 5252 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 || || ||||| || || || ||||||||||| || ||||||||||| ||||||||||| Sbjct 5251 TTTGCCAGCGAAAATGAGACGCTGTTGGTCTGGCGGGATGCCTTCTTTATCTTGAATTTT 5192 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTCTTTCC 195113 ||| ||||| ||||| ||||| ||| || ||||| || || | |||||| || Sbjct 5191 CGTCTTCACGTTTTCAATCGTGTC---GCTTGGCTCAACTTCTAGAGTGATCGTCTTGCC 5135 Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| ||||| | ||||| Sbjct 5134 AGTCAAGGTTTTCACGAAAATCTGCAT 5108 Score = 147 bits (162), Expect = 5e-30 Identities = 159/207 (77%), Gaps = 8/207 (4%) Strand=Plus/Minus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGG-CAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||| || || || || || |||||||| || | |||| |||| |||||||| || || Sbjct 5538 TGAAGGGTTGATTCCTTCTGGATATTGTAGTCAGACAAG-GTTCGACCATCTTCCAGTTG 5480 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| ||||| ||||| || |||||||| ||||| || || ||||||||||||||||| || Sbjct 5479 CTTGCCTGCAAAGATGAGACGTTGTTGATCTGGTGGGATTCCTTCTTTGTCTTGAATCTT 5420 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTT---TCCACTTCAAGGGTAACCGTCTTTCC 195113 | ||| || |||||||| ||||| ||| || || |||||||||| || || || Sbjct 5419 TGTCTTCACATTCTCAATTGTGTC---GCTTGCCTCAACCTCAAGGGTAATAGTTTTACC 5363 Query 195114 TGTCAAAGTTTTTACGAACACTTGCAT 195140 ||||| ||||| || || | ||||| Sbjct 5362 AGTCAAGGTTTTCACAAAAATCTGCAT 5336 >seq80964 Length=1525 Score = 95.1 bits (104), Expect = 3e-14 Identities = 75/90 (83%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 ||||||| ||||||||||| | |||||| | |||||||| || ||||| ||||| |||| Sbjct 692 CTTTTTGGATATTGTAATCCGAAAGAGTGCGTCCATCTTCAAGTTGCTTTCCTGCAAAGA 751 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTT 195040 | || | ||| |||||||||||||| |||| Sbjct 752 TCAGCCTTTGCTGGTCTGGAGGAATTCCTT 781 >seq80965 Length=1158 Score = 91.5 bits (100), Expect = 3e-13 Identities = 74/90 (82%), Gaps = 0/90 (0%) Strand=Plus/Plus Query 194951 CTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGCTTACCTGCGAAGA 195010 ||||||| ||||||||||| | |||||| | |||||||| || ||||| ||||| |||| Sbjct 681 CTTTTTGGATATTGTAATCCGAAAGAGTGCGTCCATCTTCAAGTTGCTTTCCTGCAAAGA 740 Query 195011 TAAGTCGTTGTTGGTCTGGAGGAATGCCTT 195040 | || | ||| |||||||| ||||| |||| Sbjct 741 TCAGCCTTTGCTGGTCTGGGGGAATTCCTT 770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1107050041749651