Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq109567 122 6e-23 >seq109567 Length=8344 Score = 122 bits (134), Expect = 6e-23 Identities = 156/213 (73%), Gaps = 4/213 (2%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATC 34831 ||||||||||| ||| ||||||||||||||| || || || ||| |||| |||| || Sbjct 5773 AACCAAGTGAAGAGTGGATTCTTTCTGAATGTTGTAATCAGACAGGGTTCGGCCATCTTC 5714 Query 34832 CAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCT 34891 ||| || || || ||||| || || ||||| |||||| | || | ||| || ||||| Sbjct 5713 CAGTTGCTTGCCTGCAAAGATGAGACGTTGTTGGTCTGGTGGGATCCCTTCTTTGTCTTG 5654 Query 34892 AATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGTT 34949 ||| || ||| || || || || | || | || || || || | |||||| ||| Sbjct 5653 AATTTTGGTTTTCAC--ATTCTCAATGGTGTCGCTTGCTTCCACTTCTAGGGTTATTGTT 5596 Query 34950 TTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || || || |||||||| ||||||||| Sbjct 5595 TTGCCAGTCAGGGTTTTCACAAAAATCTGCATA 5563 Score = 96.9 bits (106), Expect = 2e-15 Identities = 152/213 (71%), Gaps = 6/213 (3%) Strand=Plus/Minus Query 34772 AACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTC-CGAAAGGCTTCGTTCATCAT 34830 ||||||||||| || ||||||||| ||||| ||||| | || | |||| |||| | Sbjct 4861 AACCAAGTGAAGGGTTGATTCTTTCTGTATGTTGTAGTCACTCAAAG-TTCGGCCATCTT 4803 Query 34831 CCAGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGC 34890 | || ||||| || || || || || ||||| |||||| |||| | || || ||||| Sbjct 4802 CGAGTTGTTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGCGGGATGCCTTCTTTGTCTT 4743 Query 34891 TAATCTTCTGTTTGACGGATGCT--ATCGATTCACCGGCCTCAACATCGACGGTTATGGT 34948 ||||||| || || || || || | |||| || ||||| || | ||| || || Sbjct 4742 GAATCTTCGTCTTTAC--ATTCTCGATAGTATCACTGGGTTCAACCTCAAGGGTGATAGT 4685 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || | || ||||||||||| ||||| Sbjct 4684 CTTGCCAGTTAAGGTTTTCACAAAGATTTGCAT 4652 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323956833594984