Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_016072.1 Length=1259197 Score E Sequences producing significant alignments: (Bits) Value seq919 282 3e-70 seq154533 159 3e-33 seq920 125 6e-23 seq50382 122 7e-22 seq51076 116 3e-20 seq109567 114 1e-19 seq145719 105 5e-17 seq148379 89.7 4e-12 seq80964 86.0 5e-11 >seq919 Length=2745 Score = 282 bits (312), Expect = 3e-70 Identities = 474/682 (70%), Gaps = 8/682 (1%) Strand=Plus/Minus Query 551912 AACTGCTTGCGAAAGAGCCAAACGAGCTCTTTCATCTGGTACTCAAACCACTATTGAAGT 551971 ||| ||||| ||| |||| || || | || ||||| || ||||| | || ||||| | Sbjct 867 AACCGCTTGTGAACGAGCAAAGAGAACCCTGTCATCCAGTGCTCAAGCGACCATTGAGAT 808 Query 551972 AGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCGAGGGCCAAATTTGAAGA 552031 |||||||| ||||| || ||||||| |||| | || | || || | ||||||||| Sbjct 807 CGATTCATTGTTTGAAGGCATTGATTTCTATACATCGATCACAAGAGCAAGATTTGAAGA 748 Query 552032 TATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCAGTAGAACAAGTTTTAAGAGATTC 552091 | ||| ||||||||| | | ||| | |||||||| || ||| ||| | |||| | Sbjct 747 ACTCTGTGGTGATCTCTTCAAAGGTACATTGGAACCAGTTGAGAAAGCTTTGAAAGATGC 688 Query 552092 AAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTGGTGGATCTACAAGAATTCC 552151 ||| | ||| ||||| ||||| |||| || |||||||| || || | || || Sbjct 687 AAAACTCTCCAAAGATAAAGTTGATGAAGTTGTTCTGGTTGGTGGCTCCACCCGTATACC 628 Query 552152 TAAAATTCGCGAAATGTT-AAGTTCTTATTTCAATGGTAAAAAATTAAATGAAAGTGTTA 552210 ||| || | || || | || || ||| || |||| || | || | | | | Sbjct 627 TAAGATCCAGAAATTGCTGAAAGAGTTCTTTGGCTG-TAAAGAACTGAACAAGTCTATCA 569 Query 552211 ATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAGCTATTCTTTCTGGA---C 552267 |||| || || |||||||| |||||||| || | ||||| |||||||| || ||| | Sbjct 568 ATCCCGACGAAGCTGTTGCTTATGGTGCAGCTGTACAAGCTGCTATTCTGTCAGGAGATC 509 Query 552268 AAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTACTCCTCTATCTCTTGGTT 552327 ||| ||| || | | | | | |||||| |||| ||||| |||||||||||| Sbjct 508 AAAGTGAGGATGTTAAAGACATTCTCTTACTTG---ATGTCACTCCATTATCTCTTGGTT 452 Query 552328 TAGAAACAGTTGGAGGTATTATGACTAATCTTATCGATAGAAATACTACTATTCCTTGTA 552387 | || |||| ||| || ||||||| ||||| |||||||| ||| | || | Sbjct 451 TGGAGACAGCTGGTGGAGTTATGACAGCGATTATCCCAAGAAATACAACTGTACCAACAA 392 Query 552388 AAAAATCTCGTGTATTTTCTACGTATTCAGATAATCAAACTGCTGTTACAATTCAAATTT 552447 | || | | ||| | || || || ||||| ||| ||| ||| || ||| | | Sbjct 391 AGAAGACGCAAACATTCACAACTTACTCTGATAACCAACCTGGTGTACTCATCCAAGTAT 332 Query 552448 TTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTTAATTTAGAAG 552507 ||||||| ||| || | | || || |||||||||| ||||||| ||| | ||| | Sbjct 331 TTGAAGGTGAACGAGCAATGACCAAGGATAATAATCTTCTTGGTAAGTTTGAGTTATCTG 272 Query 552508 GTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGATATCGATGCCA 552567 |||||||||||||||| |||||||| || |||||||| || || || ||||| || || | Sbjct 271 GTATTCCTCCTGCTCCACGTGGAGTCCCTCAAATTGATGTCACCTTTGATATTGACGCTA 212 Query 552568 ATGGAATTTTGAATGTGACTGC 552589 |||| ||||| ||||||| ||| Sbjct 211 ATGGTATTTTAAATGTGAATGC 190 Score = 120 bits (132), Expect = 2e-21 Identities = 105/131 (80%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 550331 ATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAAGAA 550390 |||||||||||||| |||| ||||||||| |||| || |||| | ||||| || Sbjct 1376 ATTTCATCTATGGTGTTAACTAAAATGAAAGAAACTGCTGAAGCTTATCTTGGTAAAAGT 1317 Query 550391 GTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCTACT 550450 || || || || || || |||||||||||||| || ||||| |||||||| |||||||| Sbjct 1316 GTGACAGACGCCGTCATCACTGTACCAGCATACTTCAATGATTCACAACGACAAGCTACC 1257 Query 550451 AAAGATGCTGG 550461 ||||||||||| Sbjct 1256 AAAGATGCTGG 1246 >seq154533 Length=1439 Score = 159 bits (176), Expect = 3e-33 Identities = 279/403 (69%), Gaps = 10/403 (2%) Strand=Plus/Minus Query 551955 CAAACCACTATTGAAGTAGATTCATTATTTGAGGGAATTGATTATAATACGCCTATTTCG 552014 ||| | | |||||| | ||||| || ||||| || ||||||| |||| | || | Sbjct 413 CAAGCAAGTATTGAGATTGATTCCTTGTTTGAAGGCATTGATTTCTATACAACCATCACA 354 Query 552015 AGGGCCAAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATT--GAACCAGTAG 552072 || || | ||||||||| | ||| |||||| || |||| || || |||||||| | Sbjct 353 AGAGCAAGATTTGAAGAACTCTGTGGTGATCTGTT--GAAAGGCACTTTGGAACCAGTTG 296 Query 552073 AACAAGTTTTAAGAGATTCAAAGATTGATAAATCCAAAGTACATGAAATTGTGCTTGTTG 552132 | ||| ||| | |||| | || | ||| ||| | |||||||||| || |||| Sbjct 295 AGAAAGCTTTGAAAGATGCCAAACTCTCCAAAGATAAAATCAATGAAATTGTTCTGGTTG 236 Query 552133 GTGGATCTACAAGAATTCCTAAAATTCGCGAAATGTTAAGTTCTTATTTCAATGGTAAAA 552192 |||| || || | || ||||| || | || || | | || |||||||||||| Sbjct 235 GTGGCTCCACCCGTATACCTAAGATCCAGAAATTGCTGAAAGATTTCTTCAATGGTAAAG 176 Query 552193 AATTAAATGAAAGTGTTAATCCAGATGAGGCTGTTGCCTATGGTGCCGCAATTCAAGCAG 552252 || | || | | | ||||| ||||| |||||||| |||||||| || | ||||| | Sbjct 175 AACTGAACAAGTCTATCAATCCCGATGAAGCTGTTGCTTATGGTGCAGCCGTACAAGCTG 116 Query 552253 CTATTCTTTCTGGA---CAAACTGATGAAAAACTACAAAATATTGTACTTGTAGATGTTA 552309 ||||||| || ||| |||| ||| | || | || |||| | || |||| || | Sbjct 115 CTATTCTGTCAGGAGATCAAAGTGA---ACAAGTGAAAGATATCCTTCTCATAGACGTCA 59 Query 552310 CTCCTCTATCTCTTGGTTTAGAAACAGTTGGAGGTATTATGAC 552352 |||| ||||||||||||| || |||| ||| || ||||||| Sbjct 58 CTCCATTATCTCTTGGTTTGGAGACAGCTGGTGGAGTTATGAC 16 Score = 93.3 bits (102), Expect = 3e-13 Identities = 101/134 (75%), Gaps = 0/134 (0%) Strand=Plus/Minus Query 550328 CAAATTTCATCTATGGTTTTAATGAAAATGAAACAAACAGCCAGTGCTTTTGTTGGTCAA 550387 || |||||||| ||||| || | |||||||| || ||| |||| | ||||| || Sbjct 965 CAGATTTCATCAATGGTGTTGACCAAAATGAAGGAAGTAGCAGAAGCTTATCTTGGTAAA 906 Query 550388 GAAGTTACGGATGCAGTAATAACTGTACCAGCATATTTTAATGACTCACAACGTCAAGCT 550447 || || ||||| || | || ||||||||||| || ||||| ||||||||||| || Sbjct 905 ACTGTGACAGATGCTGTGGTCACCGTACCAGCATACTTCAATGATTCACAACGTCAGGCC 846 Query 550448 ACTAAAGATGCTGG 550461 || ||||||||||| Sbjct 845 ACCAAAGATGCTGG 832 >seq920 Length=2663 Score = 125 bits (138), Expect = 6e-23 Identities = 119/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 552438 ATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTT 552497 || ||| | |||||||| ||| || | | || || |||||||||| ||||||| ||| Sbjct 2660 ATCCAAGTATTTGAAGGTGAACGAGCAATGACCAAGGATAATAATCTTCTTGGTAAGTTT 2601 Query 552498 AATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGAT 552557 | ||| ||||||||||||||||| |||||||| || |||||||| || || || ||| Sbjct 2600 GAATTATCTGGTATTCCTCCTGCTCCACGTGGAGTCCCTCAAATTGATGTCACCTTTGAT 2541 Query 552558 ATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 || || || ||||| ||||| ||||||| ||| Sbjct 2540 ATTGACGCTAATGGTATTTTAAATGTGAATGC 2509 >seq50382 Length=326 Score = 122 bits (134), Expect = 7e-22 Identities = 118/152 (78%), Gaps = 0/152 (0%) Strand=Plus/Minus Query 552438 ATTCAAATTTTTGAAGGAGAAAGAAAATTCACTAAAGATAATAATCAACTTGGTACTTTT 552497 || ||| | |||||||| ||| || | | || || |||||||||| ||||||| ||| Sbjct 326 ATCCAAGTATTTGAAGGTGAACGAGCAATGACCAAGGATAATAATCTTCTTGGTAAGTTT 267 Query 552498 AATTTAGAAGGTATTCCTCCTGCTCCTCGTGGAGTACCGCAAATTGAAGTTACTTTCGAT 552557 | || ||||||||||||||||| |||||||| || |||||||| || || || ||| Sbjct 266 GAGTTGTCTGGTATTCCTCCTGCTCCACGTGGAGTCCCTCAAATTGATGTCACCTTTGAT 207 Query 552558 ATCGATGCCAATGGAATTTTGAATGTGACTGC 552589 || || || ||||| ||||| ||||||| ||| Sbjct 206 ATTGACGCTAATGGTATTTTAAATGTGAATGC 175 >seq51076 Length=2317 Score = 116 bits (128), Expect = 3e-20 Identities = 118/154 (77%), Gaps = 0/154 (0%) Strand=Plus/Minus Query 549991 AGCTATAGGTATAGATTTAGGAACCACATATAGTTGTGTTGGTGTTTGGCAAAATGGTAA 550050 |||| | ||||| |||||||| || || ||| ||||||||||| | ||| |||| || Sbjct 263 AGCTGTTGGTATTGATTTAGGTACAACCTATTCGTGTGTTGGTGTATTTCAACATGGCAA 204 Query 550051 AGTTGAAATTATTGCCAATGATCAAGGTAACAGAACTACTCCATCTTATGTTTCTTTCAC 550110 |||||||||||| || ||||| ||||| |||||||| || || |||||| | |||| Sbjct 203 AGTTGAAATTATCGCAAATGACCAAGGGAACAGAACAACGCCGAGTTATGTCGCCTTCAA 144 Query 550111 GGAAACTGAACATTTAGTTGGTGATGCAGCAAAA 550144 || |||||| || |||| ||||| |||||| Sbjct 143 CGACACTGAAAGATTGATTGGAGATGCGGCAAAA 110 >seq109567 Length=8344 Score = 114 bits (126), Expect = 1e-19 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || | ||||||||| ||| || |||||||| |||| | |||| Sbjct 5553 AGACGTAGAACCAAATGAAGGGTTGATTCCTTCTGGATATTGTAGTCAGACAAGGTTCGA 5494 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| ||||| || || ||||| || || | ||| ||||| || || ||||||||| Sbjct 5493 CCATCTTCCAGTTGCTTGCCTGCAAAGATGAGACGTTGTTGATCTGGTGGGATTCCTTCT 5434 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGT-ACATTCGAGAGT 563435 || |||||||| ||| || || ||||||||| || | || | | || || || Sbjct 5433 TTGTCTTGAATCTTTGTCTTCACATTCTCAATTGTGTC-GCTTGCCTCAACCTCAAGGGT 5375 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 || |||||||||||| | ||||| || ||||| |||||| Sbjct 5374 AATAGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCATA 5335 Score = 114 bits (126), Expect = 1e-19 Identities = 159/220 (72%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 |||||||| || | ||||| || |||||| ||| |||||||||| || |||| Sbjct 5781 AGACGGAGAACCAAGTGAAGAGTGGATTCTTTCTGAATGTTGTAATCAGACAGGGTTCGG 5722 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| ||||| || || ||||| || || | ||| || || || || || |||||| Sbjct 5721 CCATCTTCCAGTTGCTTGCCTGCAAAGATGAGACGTTGTTGGTCTGGTGGGATCCCTTCT 5662 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACA-TTCGAGAGT 563435 || ||||||||||| ||| || |||||| || || | || | || ||| || || Sbjct 5661 TTGTCTTGAATTTTGGTTTTCACATTCTCAATGGTGTC-GCTTGCTTCCACTTCTAGGGT 5603 Query 563436 AACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | ||||| ||||| || ||||| || ||||| |||||| Sbjct 5602 TATTGTTTTGCCAGTCAGGGTTTTCACAAAAATCTGCATA 5563 Score = 111 bits (122), Expect = 1e-18 Identities = 156/219 (71%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || | ||||||||| |||||| |||||||| |||| | |||| Sbjct 5097 AGACGTAGAACCAAATGAAGGGTTGATTCTTTCTGGATATTGTAGTCAGACAAGGTTCGG 5038 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| |||||||| || || ||||| || | ||| ||||| || || || |||||| Sbjct 5037 CCATCTTCCAGTTGTTTGCCAGCGAAAATGAGACGTTGTTGATCTGGCGGGATGCCTTCT 4978 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 || ||||||||||| ||||| ||||| || || | | | ||| ||||| Sbjct 4977 TTGTCTTGAATTTTCGTCTTTACATTTTCAATCGTGTCGCTTGGCTCAACTTCTAGAGTG 4918 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || || ||||| | ||||| |||||||| |||||| Sbjct 4917 ATCGTCTTGCCAGTCAAGGTTTTCACGAAAATCTGCATA 4879 Score = 102 bits (112), Expect = 7e-16 Identities = 154/219 (70%), Gaps = 0/219 (0%) Strand=Plus/Minus Query 563257 AGACGGAGTACAAGATGAAGGGTACTTTCTTTGGTAATATTGTAATCAGCTAGAGTTCTT 563316 ||||| || || | ||||||||| |||||| |||||||| |||| | |||| Sbjct 5325 AGACGTAGAACCAAATGAAGGGTCGATTCTTTCTGGATATTGTAGTCAGACAAGGTTCGA 5266 Query 563317 GAATCTTCAAGTTGTTTTCCGGCAAAAATAAGTCTTTGCTGATCAGGAGGAATTCCTTCT 563376 |||||| |||||||| || || ||||| || | || || || || || || |||||| Sbjct 5265 CCATCTTCCAGTTGTTTGCCAGCGAAAATGAGACGCTGTTGGTCTGGCGGGATGCCTTCT 5206 Query 563377 TTATCTTGAATTTTTTGTTTTACTGCCTCAATTGTATCAGTGTGAGTACATTCGAGAGTA 563436 |||||||||||||| || || ||||| || || | | | ||| ||||| Sbjct 5205 TTATCTTGAATTTTCGTCTTCACGTTTTCAATCGTGTCGCTTGGCTCAACTTCTAGAGTG 5146 Query 563437 ACAGTTTTACCAGTAAGAGTTTTAACGAAAATTTGCATA 563475 | || || ||||| | ||||| |||||||| |||||| Sbjct 5145 ATCGTCTTGCCAGTCAAGGTTTTCACGAAAATCTGCATA 5107 >seq145719 Length=1136 Score = 105 bits (116), Expect = 5e-17 Identities = 99/126 (79%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 428255 GTAAAGATATATCTTGCGCTTGCGGAATCTTTACCTCCTGACATTCTAGTTCCAAATTGT 428314 || ||||||||||| | || || ||||||||||| || ||||| || ||||| || Sbjct 133 GTGAAGATATATCTGGGACTAGCAGAATCTTTACCACCATGTATTCTGGTACCAAACTGA 192 Query 428315 CCATTAGGCATCAATAAATTAATATTATTACTTCCCACATAATTTTGGGCCATATTAACA 428374 ||| ||||||||||||| | ||| ||||| || |||||||| || |||| ||||||| Sbjct 193 CCAATAGGCATCAATAATGATAAATTGTTACTACCAACATAATTCTGTGCCAAATTAACA 252 Query 428375 ATGGTA 428380 |||||| Sbjct 253 ATGGTA 258 >seq148379 Length=4047 Score = 89.7 bits (98), Expect = 4e-12 Identities = 109/149 (73%), Gaps = 0/149 (0%) Strand=Plus/Minus Query 394007 GTCACAATTTCATCAAATGTTAAATTCATTGCAATAATTTGTGGTAGTCCCACTTCATTA 394066 || || ||||| ||| || || ||| |||||| ||| ||| | || |||| || | Sbjct 1260 GTAACTATTTCTGGAAACGTCAAGTTCTGTGCAATCATTCTTGGAACACCAACTTGATCA 1201 Query 394067 AGAGCAATATTTGGATCCGAGGTAATAACTGTACGACCTGACATATCCACACGTTTTCCC 394126 | || | ||| ||||| | || ||||| | ||| |||| | ||| || ||||||||| Sbjct 1200 ATCGCCAAATTAGGATCAGGTGTGATAACAGCGCGAGCTGAAAAATCTACTCGTTTTCCC 1141 Query 394127 ATAAGATTTCCACGAATTCTACCTTCTTT 394155 ||||||||||| || || || |||||||| Sbjct 1140 ATAAGATTTCCTCGGATCCTTCCTTCTTT 1112 >seq80964 Length=1525 Score = 86.0 bits (94), Expect = 5e-11 Identities = 73/89 (82%), Gaps = 2/89 (2%) Strand=Plus/Plus Query 563286 TTTGGTAATATTGTAATCAGCTAGAGTTCTTGAATCTTCAAGTTGTTTTCCGGCAAAAAT 563345 ||||| ||||||||||| | ||||| | | |||||||||||| ||||| ||||| || Sbjct 695 TTTGG--ATATTGTAATCCGAAAGAGTGCGTCCATCTTCAAGTTGCTTTCCTGCAAAGAT 752 Query 563346 AAGTCTTTGCTGATCAGGAGGAATTCCTT 563374 || |||||||| || ||||||||||||| Sbjct 753 CAGCCTTTGCTGGTCTGGAGGAATTCCTT 781 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 4020249945910970