Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq109567 167 2e-36 >seq109567 Length=8344 Score = 167 bits (184), Expect = 2e-36 Identities = 181/240 (75%), Gaps = 0/240 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || | || ||||| ||| ||||||||||| |||||||| || |||||||| || | Sbjct 5106 CCACCACGTAGACGTAGAACCAAATGAAGGGTTGATTCTTTCTGGATATTGTAGTCAGAC 5047 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||| | |||| |||| ||| || || || || || | ||| |||||||| ||||| Sbjct 5046 AAGGTTCGGCCATCTTCCAGTTGTTTGCCAGCGAAAATGAGACGTTGTTGATCTGGCGGG 4987 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||||||||| ||||||||||| |||||| |||| | ||||| | || ||| Sbjct 4986 ATGCCTTCTTTGTCTTGAATTTTCGTCTTTACATTTTCAATCGTGTCGCTTGGCTCAACT 4927 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATGGTTACGCGAAGA 101482 || ||||||| ||| ||||| || || ||||| || || |||||||| |||||||| Sbjct 4926 TCTAGAGTGATCGTCTTGCCAGTCAAGGTTTTCACGAAAATCTGCATACCACCGCGAAGA 4867 Score = 158 bits (174), Expect = 1e-33 Identities = 171/227 (75%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || | || ||||| ||| ||||||||||| |||||||| || |||||||| || | Sbjct 5334 CCACCACGTAGACGTAGAACCAAATGAAGGGTCGATTCTTTCTGGATATTGTAGTCAGAC 5275 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||| |||| |||| ||| || || || || || | ||||||||| || ||||| Sbjct 5274 AAGGTTCGACCATCTTCCAGTTGTTTGCCAGCGAAAATGAGACGCTGTTGGTCTGGCGGG 5215 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 ||||||||||||||||||||||| || || |||| | ||||| | || ||| Sbjct 5214 ATGCCTTCTTTATCTTGAATTTTCGTCTTCACGTTTTCAATCGTGTCGCTTGGCTCAACT 5155 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || ||||||| ||| ||||| || || ||||| || || |||||||| Sbjct 5154 TCTAGAGTGATCGTCTTGCCAGTCAAGGTTTTCACGAAAATCTGCAT 5108 Score = 149 bits (164), Expect = 5e-31 Identities = 171/230 (74%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 101240 TTTCCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCG 101299 ||||| || | | ||| | ||| || ||||| || |||||||| || || |||||||| Sbjct 5793 TTTCCACCACGAAGACGGAGAACCAAGTGAAGAGTGGATTCTTTCTGAATGTTGTAATCA 5734 Query 101300 GCGATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGC 101359 | | |||| | |||| |||| |||||| |||||||| || | ||| ||||| || || Sbjct 5733 GACAGGGTTCGGCCATCTTCCAGTTGCTTGCCTGCAAAGATGAGACGTTGTTGGTCTGGT 5674 Query 101360 GGAATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCC 101419 || || |||||||| ||||||||||| ||| ||| | || | ||||| | |||| Sbjct 5673 GGGATCCCTTCTTTGTCTTGAATTTTGGTTTTCACATTCTCAATGGTGTCGCTTGCTTCC 5614 Query 101420 ACTTCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || | |||||||| || | ||||| ||||| |||||||| Sbjct 5613 ACTTCTAGGGTTATTGTTTTGCCAGTCAGGGTTTTCACAAAAATCTGCAT 5564 Score = 143 bits (158), Expect = 2e-29 Identities = 162/217 (75%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 101254 ACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGC 101313 ||| | ||| || |||||||| |||||||| ||||| ||||| || | ||||| | | Sbjct 4867 ACGAAGAACCAAGTGAAGGGTTGATTCTTTCTGTATGTTGTAGTCACTCAAAGTTCGGCC 4808 Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || | ||| || || || || || | ||| ||||| || ||||| ||||||||||| Sbjct 4807 ATCTTCGAGTTGTTTGCCAGCGAAGATGAGACGTTGTTGGTCTGGCGGGATGCCTTCTTT 4748 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 |||||||| || |||||| | || | ||| ||| | ||| || ||||| |||| Sbjct 4747 GTCTTGAATCTTCGTCTTTACATTCTCGATAGTATCACTGGGTTCAACCTCAAGGGTGAT 4688 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCATG 101470 || ||||| ||||| ||||| ||||| || |||||| Sbjct 4687 AGTCTTGCCAGTTAAGGTTTTCACAAAGATTTGCATG 4651 Score = 143 bits (158), Expect = 2e-29 Identities = 168/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 101243 CCTCCTCTTAAACGTAAAACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCG 101302 || || | || ||||| ||| ||||||||||| ||||| || || |||||||| || | Sbjct 5562 CCACCACGTAGACGTAGAACCAAATGAAGGGTTGATTCCTTCTGGATATTGTAGTCAGAC 5503 Query 101303 ATAGTTCTGGCATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGA 101362 | |||| |||| |||| |||||| |||||||| || | ||| |||||||| || || Sbjct 5502 AAGGTTCGACCATCTTCCAGTTGCTTGCCTGCAAAGATGAGACGTTGTTGATCTGGTGGG 5443 Query 101363 ATGCCTTCTTTATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACT 101422 || |||||||| |||||||| ||| || ||| | || | ||||| | || || Sbjct 5442 ATTCCTTCTTTGTCTTGAATCTTTGTCTTCACATTCTCAATTGTGTCGCTTGCCTCAACC 5383 Query 101423 TCAAGAGTGACCGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || | ||||| || || || ||||| ||||| |||||||| Sbjct 5382 TCAAGGGTAATAGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 5336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395452275075921