Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq913 113 1e-19 >seq913 Length=7837 Score = 113 bits (124), Expect = 1e-19 Identities = 320/485 (66%), Gaps = 10/485 (2%) Strand=Plus/Plus Query 150307 AGAAGGTAAACTTGATCCACTAATTGGTCGCGAAACTGAACTTGATGATCTAATTCAGAT 150366 ||| | |||| | |||||| | ||||| || | ||| || || | | |||| || Sbjct 194 AGATGATAAATTAGATCCAGTTATTGGCCGAGCTGACGAAATTAATCGTATTATTCGTAT 253 Query 150367 TCTTTCTCGTAAAACCAAAAAGAATG--GTGCGTTAGTTGGTGAACCAGGTGTTGGTAAA 150424 | || |||||||| ||||| ||| || | ||| | || ||||| |||||||||||| Sbjct 254 ATTATCGCGTAAAACTAAAAATAATCCCGTTC-TTA-TCGGAGAACCCGGTGTTGGTAAA 311 Query 150425 ACACAAATCGTTGACGGATTAGCACAACGCATCGCTAATGGTGATGTTCCAGATTCTATG 150484 ||| || || || || ||||| ||||| || || |||||||| || || | || Sbjct 312 ACAGCCATTGTAGAAGGGTTAGCCCAACGAATTATTAGAGGTGATGTACCTAATAATTTG 371 Query 150485 AAAGATGTTGAAATTCTTTCTTTGAATATGGGTGCATTTACTGCTGGTACTAAGTATCGT 150544 | ||| | |||| | || ||||||| | || ||||| |||| | || Sbjct 372 AGTGATAAAGTAATTTATCAATTAGATATGGGATCCTTATTAGCTGGAGCTAAATTTCAA 431 Query 150545 GGTGAATTCGAAGAACGTGTAGACAATTTGCTACA-AGAACTAAAA--GAACGCGATGAT 150601 || || || ||||||||| || | | ||||| | || ||||| | || || | Sbjct 432 GGAGAGTTTGAAGAACGTTTAAAAGCGGTTCTACACAAAATTAAAAATTCAGGCAATACT 491 Query 150602 GTTATTCTGTTCATCGATGAAATCCATACTATTATGGGTGCTGGTGCGACTGGCGGCGGT 150661 |||||| | ||||| |||||| | ||| ||| | ||||| || ||| ||| Sbjct 492 GTTATTTTATTCATTGATGAATTACATTTAATTGTTGGTGCAGGACGTACT---CAAGGT 548 Query 150662 TCTTTGGATATGAGCAATATGTTAAAACCTGCTCTATCTCGCGGTGAAATTCGTGTCATC 150721 | ||||| || ||| | |||||||| ||| || || ||| | ||| || Sbjct 549 AGTATGGATGCAAGTAATTTATTAAAACCGATGCTAGCTAAGGGCGAATTACGTTGTATT 608 Query 150722 GGTGCAACAACCTACGATGAATATCGTAAACACATTGAAAAAGATGCAGCACTACAGCGT 150781 ||||| ||||| | |||||| | || || |||| |||||||| ||||| || | || Sbjct 609 GGTGCTACAACATTAGATGAACACCGCGAATACATAGAAAAAGACGCAGCCTTAGAACGC 668 Query 150782 CGTTT 150786 ||||| Sbjct 669 CGTTT 673 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1145075321872394