Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_019515.1 Length=93839 Score E Sequences producing significant alignments: (Bits) Value seq3816 105 4e-18 >seq3816 Length=23136 Score = 105 bits (116), Expect = 4e-18 Identities = 145/203 (71%), Gaps = 0/203 (0%) Strand=Plus/Minus Query 78318 GGTAAAACTTTAGTAATTCGTCTTGTCTGTTCCTGTACTTGCGGTATATGATTCTTGTAA 78377 || |||||||| | |||| || | ||||| |||||||||| |||||| || ||| Sbjct 19044 GGCAAAACTTTGGGCTTTCGATTTATTTGTTCTAAAACTTGCGGTAAATGATTGTTATAA 18985 Query 78378 ATATGAGCGTCACCGATTGTGTGAATGAAGTCTCCTACTTCCAGTCCGCACAAATGCGCA 78437 ||||||||||| || | ||||||||||| || || || | || |||| || || Sbjct 18984 ATATGAGCGTCTCCAAAAGTGTGAATGAATTCACCAGGTTTGAAGCCACACACCTGTGCG 18925 Query 78438 ATAATATGTGTAAGTAATGCGTATGAAGCAATGTTAAATGGAATTCCTAAGAATACGTCA 78497 || || | ||||| || || ||||| || ||||| |||| ||||| || | ||| Sbjct 18924 ATCATGAGGGTAAGCAAACTATAGGAAGCTATATTAAACGGAACTCCTAGAAAGGCATCA 18865 Query 78498 CCGCTTCGTTGGTACAATTGGCA 78520 | || |||||||| ||||| || Sbjct 18864 GCACTACGTTGGTATAATTGACA 18842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 299534253915400