Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq109567 127 4e-24 >seq109567 Length=8344 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||||||| || ||||| | || | ||||| |||||| || ||| Sbjct 5109 ATACCACCACGTAGACGTAGAACCAAATGAAGGGTTGATTCTTTCTGGATATTGTAGTCA 5050 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || ||||| |||| |||| |||||| ||||| || || | | |||||||| || Sbjct 5049 GACAAGGTTCGGCCATCTTCCAGTTGTTTGCCAGCGAAAATGAGACGTTGTTGATCTGGC 4990 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||| ||||| ||||| | |||||||| || | || | || Sbjct 4989 GGGATGCCTTCTTTGTCTTGAATTTTCGTCTTTACATTTTCAATCGTGTCGCTTGGCTCA 4930 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||||||| || || || ||||| || ||||| | || |||||||| Sbjct 4929 ACTTCTAGAGTGATCGTCTTGCCAGTCAAGGTTTTCACGAAAATCTGCAT 4880 Score = 127 bits (140), Expect = 4e-24 Identities = 166/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||||||| || ||||| | || | || || |||||| || ||| Sbjct 5565 ATACCACCACGTAGACGTAGAACCAAATGAAGGGTTGATTCCTTCTGGATATTGTAGTCA 5506 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || ||||| |||| |||| ||| || || |||||||| | | |||||||| ||| Sbjct 5505 GACAAGGTTCGACCATCTTCCAGTTGCTTGCCTGCAAAGATGAGACGTTGTTGATCTGGT 5446 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || ||||||||||| ||||| || || | || ||||| || | || | || Sbjct 5445 GGGATTCCTTCTTTGTCTTGAATCTTTGTCTTCACATTCTCAATTGTGTCGCTTGCCTCA 5386 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 || || || ||||| ||||||||||| || ||||| | ||| |||||||| Sbjct 5385 ACCTCAAGGGTAATAGTTTTACCAGTCAAGGTTTTCACAAAAATCTGCAT 5336 Score = 122 bits (134), Expect = 2e-22 Identities = 165/230 (72%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 192307 ATACCACCTCTAAGACGTAATACTAAATGTAAAGTAGCCTCTTTAGAGATATTATAATCA 192366 |||||||| | ||||||| || ||||| | || | ||||| |||||| || ||| Sbjct 5337 ATACCACCACGTAGACGTAGAACCAAATGAAGGGTCGATTCTTTCTGGATATTGTAGTCA 5278 Query 192367 GATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGATTAATCTCTGTTGATCAGGT 192426 || || ||||| |||| |||| |||||| ||||| || || | | |||||| || || Sbjct 5277 GACAAGGTTCGACCATCTTCCAGTTGTTTGCCAGCGAAAATGAGACGCTGTTGGTCTGGC 5218 Query 192427 GGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGAATCTGACGATTCT 192486 || || |||||||||||||| ||||| | || || || || | || | || Sbjct 5217 GGGATGCCTTCTTTATCTTGAATTTTCGTCTTCACGTTTTCAATCGTGTCGCTTGGCTCA 5158 Query 192487 ACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAAATATCTGCAT 192536 ||||||||||| || || || ||||| || ||||| | || |||||||| Sbjct 5157 ACTTCTAGAGTGATCGTCTTGCCAGTCAAGGTTTTCACGAAAATCTGCAT 5108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 982322397326550