Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq45861 132 1e-25 seq157723 123 7e-23 >seq45861 Length=18662 Score = 132 bits (146), Expect = 1e-25 Identities = 227/324 (70%), Gaps = 8/324 (2%) Strand=Plus/Minus Query 289030 CCAACAGCATCAATTTCGTCAATGAAAATCACACACGGAGAATTTTGTCTCGCAATTGCA 289089 || || ||||||||||| |||||||| || | |||| || | | ||| |||| Sbjct 850 CCCACTGCATCAATTTCATCAATGAATATAATGGCTGGAGCCGCTTTTTTAGCATCTGCA 791 Query 289090 AATAATTCTCTTACACGGGATGCTCCAAGACCAACATACATTTCTACAAATTCAGAAGCG 289149 || | ||||| | ||||| ||||| | ||||||| | |||||| ||||||| || || Sbjct 790 AACATTTCTCGAATTCGGGACGCTCCTACACCAACAAATATTTCTTCAAATTCTGATCCG 731 Query 289150 GATACTTGAAT-GAATGTTACATTTGCTTCGCCTGCTACTGCCCTCGCCAGAAGTGTCTT 289208 |||| |||||| ||| | || ||||| || | ||| ||| | || | | || || Sbjct 730 GATA-TTGAATAGAACGGCACTCCCGCTTCTCCGGATACAGCCTTGGCTAATAAAGTTTT 672 Query 289209 ACCTGTTCCAGGTGGTCCCTCTAATAGAACTCCCTTTGGTACTTTTGCCCCAGCAGACTT 289268 ||| || || ||||| || ||||| |||||||| || || ||| | || || |||| || Sbjct 671 ACCAGTCCCTGGTGGGCCTTCTAACAGAACTCCTTTAGGAACTCTAGCTCC-GCAG--TT 615 Query 289269 ---ATATTTCTCAGGGCTCTTTAAAAATTCTACAATTTCCTCAAGTTCATATTTTGCCTC 289325 |||||||| || | || ||| | ||||| | ||| ||||| | |||| | || Sbjct 614 AGAATATTTCTGCGGATTTTTCAAATAGTCTACTAATTCGATGAGTTCGTCTTTTTCTTC 555 Query 289326 ATCACATCCTGCTACATCAGCAAA 289349 |||| |||||| || || | ||| Sbjct 554 ATCAATTCCTGCCACGTCTGTAAA 531 >seq157723 Length=4480 Score = 123 bits (136), Expect = 7e-23 Identities = 204/285 (72%), Gaps = 12/285 (4%) Strand=Plus/Minus Query 133201 GGATGAAAAACATTTTATTTCTATGATTTTAGCGTTTTTTGCTGCGAGTGATGGTATTGT 133260 |||||||| |||||| || ||| || ||||| || |||||||| |||||||||||||| Sbjct 3289 GGATGAAAGACATTTCATCTCTCATATCTTAGCCTTCTTTGCTGCCAGTGATGGTATTGT 3230 Query 133261 TCTTGAAAATTTAGGAACACGGTTTAT-GGGAGAAGTTCAACTGGCCGAAGCCCGTGCCT 133319 |||||| || || | |||| | |||||| ||| || | ||||| ||| || Sbjct 3229 GAATGAAAACTT-GGTTGAGTGTTTCTCACAAGAAGTACAAGTGCCAGAAGCTCGTTGCT 3171 Query 133320 TTTATGGGCTACAGATTGCGATGGAAAATATCCATTCTATCA--CATATTCTACTCTAAT 133377 ||||||| | || || || |||||||| |||||||| | ||| ||||||| || Sbjct 3170 TTTATGGTTTCCAAATAGCAATGGAAAACATCCATTCAGAGATGTATAGTCTACTC--AT 3113 Query 133378 TGATACTTACATCAAAGATACCGTCCAGAAGCACAA--ACTATTCAACGCCATT-AGCGA 133434 ||||| |||||||| || | || ||| | || || ||||| |||||| ||| | Sbjct 3112 AGATACATACATCAAGGAGCCAGT--GGAACGAGAACGTCTCTTCAATGCCATTGAGC-A 3056 Query 133435 ATTTCCTTGTATTAAAAAGAAATCTGACTGGGCTATTAAATGGAT 133479 | |||||| ||| |||||| | || |||||| | | ||||| Sbjct 3055 TCTCCCTTGTGTTAGGAAGAAAGCAGATTGGGCTTTAGATTGGAT 3011 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1468591940170861