Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq109567 98.7 8e-16 >seq109567 Length=8344 Score = 98.7 bits (108), Expect = 8e-16 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| ||||| ||||| ||||| || || ||| | || || || Sbjct 4652 ATGCAAATCTTTGTGAAAACCTTAACTGGCAAGACTATCACCCTTGAGGTTGAACCCAGT 4711 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| ||| | ||||| ||||||| |||||||||||| | || || ||| Sbjct 4712 GATACTATCGAGAATGTAAAGACGAAGATTCAAGACAAAGAAGGCATCCCGCCAGACCAA 4771 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || || | || || ||||| || || |||| | |||| || || |||||| Sbjct 4772 CAACGTCTCATCTTCGCTGGCAAACAACTCGAAGATGGCCGAACTTTGAGTGACTACAAC 4831 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGT 110481 || || |||||||| || | ||| |||| Sbjct 4832 ATACAGAAAGAATCAACCCTTCACTTGGT 4860 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || ||||| ||||| | || |||||||| || ||| | ||| ||| | | Sbjct 5564 ATGCAGATTTTTGTGAAAACCCTGACTGGCAAAACAATAACCCTAGAAGTGGAAGCAAGC 5623 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | || ||| || ||| ||||||||||| | || || ||| Sbjct 5624 GACACCATTGAGAATGTGAAAACCAAAATTCAAGACAAAGAAGGGATCCCACCAGACCAA 5683 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || || | ||| || || || ||||| |||| | |||| || | ||||||||| Sbjct 5684 CAACGTCTCATCTTTGCAGGCAAGCAACTGGAAGATGGCCGAACCCTGTCTGATTACAAC 5743 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA 110502 ||||| |||||||| || | ||| |||| | | || || || ||||| Sbjct 5744 ATTCAGAAAGAATCCACTCTTCACTTGGTTCTCCGTCTTCGTGGTGGAAA 5793 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 ||||| || || || ||||| || || ||||| || || || | ||| ||||| | Sbjct 4880 ATGCAGATTTTCGTGAAAACCTTGACTGGCAAGACGATCACTCTAGAAGTTGAGCCAAGC 4939 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 || || | | | ||||| ||| ||| |||||||||||| | || |||||| Sbjct 4940 GACACGATTGAAAATGTAAAGACGAAAATTCAAGACAAAGAAGGCATCCCGCCAGATCAA 4999 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | || |||| || || ||||| ||||| |||| | |||| || | || ||||| Sbjct 5000 CAACGTCTCATTTTCGCTGGCAAACAACTGGAAGATGGCCGAACCTTGTCTGACTACAAT 5059 Query 110453 ATTCAAAAAGAATCTAC 110469 || || |||||||| || Sbjct 5060 ATCCAGAAAGAATCAAC 5076 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 411980945633129