Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_022096.1 Length=258139 Score E Sequences producing significant alignments: (Bits) Value seq9074 100 5e-16 >seq9074 Length=14519 Score = 100 bits (110), Expect = 5e-16 Identities = 158/224 (71%), Gaps = 12/224 (5%) Strand=Plus/Minus Query 122611 GTTAGCTCAGTTGGTAGAGCATGGCGCTTTTAACGCCGTGGTCGTTGGTTCGAGTCCAAC 122670 ||||||||||| |||||||| | ||| ||||| ||||||| ||||||| ||| || Sbjct 5981 GTTAGCTCAGT-GGTAGAGCGTTCGGCTGTTAACCGATTGGTCGTAGGTTCGAATCCTAC 5923 Query 122671 ACGACCCACCAGTTTCATAGGCCCCATAGTCGAGCGGTTAAGACGCTTGCCTGTCACGCA 122730 || | | ||||| |||| | || || |||||| || | ||| | ||||||| Sbjct 5922 ACTAGGCGCCAGT------GGCCTGTTGGTGAAGTGGTTAACACACATGCTTTTCACGCA 5869 Query 122731 AGAAATCGCGGGTTCGATTCCCGCTGGGGTCGCCATAGGACG----TTAGCTCAGTTGGT 122786 | | | ||||||||| ||||| |||| ||||| || ||||||||||||| Sbjct 5868 TGCATGCACGGGTTCGAATCCCGTACAGGTCACCATATTTCGAGTGTTAGCTCAGTTGG- 5810 Query 122787 TAGAGCATCTGACTTTTAATCAGAGGGTCCTGGGTTCGAGTCCC 122830 ||||||| || ||| || || |||| |||||| |||||| Sbjct 5809 GAGAGCATTTGCCTTACAAGCAAGAGGTCGGGGGTTCAAGTCCC 5766 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 824150855670120