Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_023426.1 Length=245717 Score E Sequences producing significant alignments: (Bits) Value seq109567 123 4e-23 >seq109567 Length=8344 Score = 123 bits (136), Expect = 4e-23 Identities = 164/228 (72%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| || || || || || || ||| | || || || | | || Sbjct 4881 TGCAGATTTTCGTGAAAACCTTGACTGGCAAGACGATCACTCTAGAAGTTGAGCCAAGCG 4940 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| |||||||||| | ||||| ||| ||||||||||| || || ||||||| Sbjct 4941 ACACGATTGAAAATGTAAAGACGAAAATTCAAGACAAAGAAGGCATCCCGCCAGATCAAC 5000 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | |||||||| || || |||||| | || ||| |||| || | || || |||| Sbjct 5001 AACGTCTCATTTTCGCTGGCAAACAACTGGAAGATGGCCGAACCTTGTCTGACTACAATA 5060 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || |||||||| || | ||||| || |||| || | || |||| Sbjct 5061 TCCAGAAAGAATCAACCCTTCATTTGGTTCTACGTCTACGTGGTGGTA 5108 Score = 118 bits (130), Expect = 2e-21 Identities = 163/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 |||| || ||| | ||||| || || || || || || ||| | || || || | | || Sbjct 5109 TGCAGATTTTCGTGAAAACCTTGACTGGCAAGACGATCACTCTAGAAGTTGAGCCAAGCG 5168 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 | || ||| |||| || || | ||||| ||| |||||||||||| || || || |||| Sbjct 5169 ACACGATTGAAAACGTGAAGACGAAAATTCAAGATAAAGAAGGCATCCCGCCAGACCAAC 5228 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 | | |||||||| || || |||||| | || ||| | |||| || | || || |||| Sbjct 5229 AGCGTCTCATTTTCGCTGGCAAACAACTGGAAGATGGTCGAACCTTGTCTGACTACAATA 5288 Query 146212 TACAAAAAGAATCGACTATCCATTTAGTATTACGATTAAGAGGAGGTA 146259 | || ||||||||||| | ||||| || |||| || | || |||| Sbjct 5289 TCCAGAAAGAATCGACCCTTCATTTGGTTCTACGTCTACGTGGTGGTA 5336 Score = 105 bits (116), Expect = 1e-17 Identities = 141/196 (72%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 146032 TGCAAATATTCATAAAAACATTAACAGGAAAAACAATTACTATTGATGTAGAACATAACG 146091 ||||||| || | ||||| ||||| || || || || || |||| || |||| | | Sbjct 4653 TGCAAATCTTTGTGAAAACCTTAACTGGCAAGACTATCACCCTTGAGGTTGAACCCAGTG 4712 Query 146092 ATACTATTCAAAATGTAAAAAATAAAATACAACTTAAAGAAGGCATTCCACCCGATCAAC 146151 ||||||| | |||||||| | || || ||| ||||||||||| || || || |||| Sbjct 4713 ATACTATCGAGAATGTAAAGACGAAGATTCAAGACAAAGAAGGCATCCCGCCAGACCAAC 4772 Query 146152 AAAGACTCATTTTTGCAGGTAAACAATTAGATGATAATAGAACGTTAACAGATTATAATA 146211 || | ||||| || || || |||||| | || ||| |||| || | || || || | Sbjct 4773 AACGTCTCATCTTCGCTGGCAAACAACTCGAAGATGGCCGAACTTTGAGTGACTACAACA 4832 Query 146212 TACAAAAAGAATCGAC 146227 |||| |||||||| || Sbjct 4833 TACAGAAAGAATCAAC 4848 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 784485448484760