Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_023688.1 Length=222006 Score E Sequences producing significant alignments: (Bits) Value seq3816 84.2 3e-11 >seq3816 Length=23136 Score = 84.2 bits (92), Expect = 3e-11 Identities = 117/164 (71%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 191899 TGACACGGTGGCAAAGCCATTTTATCAAGATCGGCTGGGTTCCAAGCACAAACGATATTG 191958 || || || || ||||||||||| || | ||| | ||| || ||||| | || ||||| Sbjct 18798 TGGCAAGGAGGTAAAGCCATTTTTTCGATATCTGTTGGATTTCAAGCGCTAATGATATGC 18739 Query 191959 CGGCGACATTCTGGATTAGTCTTGATTCGCTCAATCGCTTTTGCAAGCTGATCGACACCA 192018 || || | | ||||||||| || | | ||| ||| |||||| || |||| Sbjct 18738 CGACGTGAATATGGATTAGTTTTTAAATTGTGAATTAAATTTTTAAGCTGGTCACAACCA 18679 Query 192019 TTAAAGTCTCGCCATTGCTTGCCATACACGGGACCAAGATCGCC 192062 ||||| ||||||||||| || ||||| ||||| || | ||| || Sbjct 18678 TTAAAATCTCGCCATTGTTTACCATATACGGGTCCCAAATCTCC 18635 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 708772481992080