Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_026430.1 Length=125767 Score E Sequences producing significant alignments: (Bits) Value seq109567 102 7e-17 >seq109567 Length=8344 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 |||||||| ||||| ||||| || ||||||||||| || ||| | || |||||| | Sbjct 4652 ATGCAAATCTTTGTGAAAACCTTAACTGGCAAGACTATCACCCTTGAGGTTGAACCCAGT 4711 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 ||| || | | | || || || ||| |||||||||||| | || || ||| Sbjct 4712 GATACTATCGAGAATGTAAAGACGAAGATTCAAGACAAAGAAGGCATCCCGCCAGACCAA 4771 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | || || | || ||||||||| | |||||| |||| || | || |||||| Sbjct 4772 CAACGTCTCATCTTCGCTGGCAAACAACTCGAAGATGGCCGAACTTTGAGTGACTACAAC 4831 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 ||||| |||||||| || || || || || Sbjct 4832 ATACAGAAAGAATCAACCCTTCACTTGGT 4860 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| ||||| || ||||| |||||||||||||| || || | ||| || || || Sbjct 4880 ATGCAGATTTTCGTGAAAACCTTGACTGGCAAGACGATCACTCTAGAAGTTGAGCCAAGC 4939 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | || || |||||| |||||||||||| | || |||||| Sbjct 4940 GACACGATTGAAAATGTAAAGACGAAAATTCAAGACAAAGAAGGCATCCCGCCAGATCAA 4999 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | || |||| || ||||||||| | |||||| ||| || || ||||| Sbjct 5000 CAACGTCTCATTTTCGCTGGCAAACAACTGGAAGATGGCCGAACCTTGTCTGACTACAAT 5059 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || || |||||||| || || ||||| || Sbjct 5060 ATCCAGAAAGAATCAACCCTTCATTTGGT 5088 Score = 93.3 bits (102), Expect = 3e-14 Identities = 146/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| |||||||| ||||| |||||||||| || || ||| | ||| ||| | || Sbjct 5564 ATGCAGATTTTTGTGAAAACCCTGACTGGCAAAACAATAACCCTAGAAGTGGAAGCAAGC 5623 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | |||||| |||||| ||||||||||| | || || ||| Sbjct 5624 GACACCATTGAGAATGTGAAAACCAAAATTCAAGACAAAGAAGGGATCCCACCAGACCAA 5683 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | || || | ||| ||||| ||| | |||||| ||| || ||||||||| Sbjct 5684 CAACGTCTCATCTTTGCAGGCAAGCAACTGGAAGATGGCCGAACCCTGTCTGATTACAAC 5743 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || || |||||||| || || || || || Sbjct 5744 ATTCAGAAAGAATCCACTCTTCACTTGGT 5772 Score = 89.7 bits (98), Expect = 4e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| ||||| || ||||| |||||||||||||| || || | ||| || || || Sbjct 5108 ATGCAGATTTTCGTGAAAACCTTGACTGGCAAGACGATCACTCTAGAAGTTGAGCCAAGC 5167 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | ||||| |||||| || ||||||||| | || || ||| Sbjct 5168 GACACGATTGAAAACGTGAAGACGAAAATTCAAGATAAAGAAGGCATCCCGCCAGACCAA 5227 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 || | || |||| || ||||||||| | |||||| | ||| || || ||||| Sbjct 5228 CAGCGTCTCATTTTCGCTGGCAAACAACTGGAAGATGGTCGAACCTTGTCTGACTACAAT 5287 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || || |||||||| || || ||||| || Sbjct 5288 ATCCAGAAAGAATCGACCCTTCATTTGGT 5316 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 106260 ATGCAAATTTTTGTTAAAACATTGACTGGCAAGACCATTACCGTGGAAACAGAACCCGGC 106319 ||||| |||||||| ||||| |||||||| || || |||||| | || || | || Sbjct 5336 ATGCAGATTTTTGTGAAAACCTTGACTGGTAAAACTATTACCCTTGAGGTTGAGGCAAGC 5395 Query 106320 GATTCTGTTGGCCAAGTGAAACAAAAAATTGCCGACAAAGAAGGCGTGCCCGTTGATCAA 106379 || | ||| | ||||| ||| ||| ||||||||||| | || |||||| Sbjct 5396 GACACAATTGAGAATGTGAAGACAAAGATTCAAGACAAAGAAGGAATCCCACCAGATCAA 5455 Query 106380 CAAAGGCTTATTTATGCGGGCAAACAATTAGAAGATTCTAAAACTATGGGCGATTACAAC 106439 ||| | || || | ||| ||||| ||| | |||||| | ||| || || ||||| Sbjct 5456 CAACGTCTCATCTTTGCAGGCAAGCAACTGGAAGATGGTCGAACCTTGTCTGACTACAAT 5515 Query 106440 ATACAAAAAGAATCTACACTACATTTAGT 106468 || || || ||||| || || ||||| || Sbjct 5516 ATCCAGAAGGAATCAACCCTTCATTTGGT 5544 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 401490860088224