Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_028898.1 Length=35764 Score E Sequences producing significant alignments: (Bits) Value seq22746 313 6e-81 >seq22746 Length=1146 Score = 313 bits (346), Expect = 6e-81 Identities = 719/1079 (67%), Gaps = 3/1079 (0%) Strand=Plus/Minus Query 24396 GTGTAGAAGATCAAACCTAATCTGACAGTCCCCCGTTTTAAATTACCGTGTCTGTCAGAT 24455 |||||||| ||| |||| | |||||||| | |||| || | ||||||||||| | Sbjct 1143 GTGTAGAAATTCAGACCTGACCTGACAGTTACGGATTTTCAAGAAG-GTGTCTGTCAGGT 1085 Query 24456 TAATTTGAGCTTAAATTCTTTTCCACCCAAATCCGTTTTCCATCAAGTAAGGTTGCCATC 24515 || || || || ||||||| ||| ||| ||| ||||||| | ||| | ||| Sbjct 1084 CAAATTCAGGCTATGAACTTTTCCTTCCAGATCTCTTTCCCATCAATCAGTGTTTCTATC 1025 Query 24516 GGTGTTCTGCCACAGCACATTTTTCCTTGATGTGTTCGATGGTGATTATAATACATTAAC 24575 || ||| | || ||| | || |||||||| || || | ||| || | || ||| Sbjct 1024 GGCGTTTTCCCGTCACACTTCTTACCTTGATGGGTACGCTCAGTATTGTAGTGAATCAAC 965 Query 24576 CACTCATCTAAATCCGCTTGTAATGTCGTTAAATCCGTATAAATTTTCTTCCTAAATGCC 24635 || || || | ||| | ||| | || | | |||||| | |||| || ||||| Sbjct 964 CATTCGTCCAGATCTGATTGAATCATCTCAATACTCGTATACAGCGTCTTTCTCAATGCA 905 Query 24636 ACTTGGTAAAATTCTTGTAAGATTGTTTTATGGAACCGTTCGCAGATGCCGTTAGTCTGC 24695 ||| ||||| || || | || ||||||||||| || || ||||| || || || ||| Sbjct 904 GGTTGATAAAACTCCTGCAGAATCGTTTTATGGAAGCGCTCACAGATTCCATTCGTTTGC 845 Query 24696 GGATGTTTTACCTTGGTTTTACTGTGTTCAATATCATTTATTGCTAAATAAAGCTCATAA 24755 ||||| | || || || | || ||||| || || | |||| ||||| | ||| Sbjct 844 GGATGCCGGGCTTTCGTCTTCGTATGCTCAATGTCGTTAACCGCTAGGTAAAGTTGATAG 785 Query 24756 TCGTGATTTTCTACCTTG-CCACAATATTCACTTCCTCGGTCAGTTAATATGCGTAACAT 24814 || || | || | || | |||||||| || | |||| ||| || | ||| | | | Sbjct 784 TCATGTTGATC-AGCTCGACCACAATACTCCGTACCTCTGTCTGTCAGTATTCTGAGTAC 726 Query 24815 CGGTAAACCTTGGCTTTCAAAGTATGGTAACACTTTATCATTCAGCATATCCGCAGCACT 24874 || | | ||| |||| | | || || || ||||| |||| ||| ||||| | Sbjct 725 AGGCAGCTCCTGGGCTTCATAAAACGGCAATACACGGTCATTGAGCAGATCAGCAGCCGT 666 Query 24875 GATAGCGGTCTTCATTGTATAAAGTTTTGCAAACGCCACTTTACTGTAAGTATCAATAAA 24934 |||| ||||| ||||||| || || || ||| || || ||||||||||| | | Sbjct 665 AATAGGCGTCTTGGTTGTATACAGCTTGGCCTGCGCTACCTTGGAGTAAGTATCAACATA 606 Query 24935 CGTTTGTTGATAAATACGACCCACTCCTTTGAGGTTGCCCACATAGAAAGTATCTTGTGA 24994 || || ||||||| ||| || || ||||||| |||| |||||||| || |||||||| Sbjct 605 GGTCTGCTGATAAACACGTCCAACGCCTTTGAATGTGCCAACATAGAAGGTGTCTTGTGA 546 Query 24995 GCCAAGATAGCCAGGGTGTGCCGTTTCAATTTCACCACAGGCAATCTCATCTTCTTTCTT 25054 ||||| || ||||| ||||| || ||||||||||||||||| ||||| |||||| Sbjct 545 ACCAAGGTAACCAGGATGTGCTGTATCAATTTCACCACAGGCTTCATCATCCAGTTTCTT 486 Query 25055 ACGCTCTAAGGCTTGTACCTGTGTTTCACTGAGTATAATACCTTGTTCTGCAACCAGTTT 25114 |||||| | || ||||||| || |||| || | |||| || || ||| | Sbjct 485 ACGCTCAAGCGCCCTGACCTGTGACTCGGTGAGAATGACCCCTTCTTGAGCCACCTTCTC 426 Query 25115 TTCCAGGGCGATTAATCTTTGCTTAAAATTGGCAAGATGATGACGTAACCAAATCGAACG 25174 || ||||| | | | | ||||| | | |||| || | | ||| || | Sbjct 425 CTCGAGGGCTTTGAGGCGCAGTTTAAAGCTTCCCAGATCATTTCTCAGCCAGATACTTCT 366 Query 25175 TACACCTCCTGCTGAAACAAAGATGCCTTGTTTACGGAGTTCGTTACTCACTCTTACCTG 25234 || || | | ||||| |||||||||| || || ||||| || || | |||| Sbjct 365 CACGCCGCTGGGAGAAACGAAGATGCCTTTCTTGCGAAGTTCATTGGAAACACGGGCCTG 306 Query 25235 TCCAAATGCCGGGTTATCAAGAGCAAACTTCACAACAGCTTGCTCTATTGCCTCATCAAC 25294 |||| || || | || | ||| ||| | ||| || | || | || || || Sbjct 305 TCCATGGGCAGGATCTTCTATCGCATACTCAAGAACTGCCTTTTCAACAGCGGGGTCTAC 246 Query 25295 ACGATTTTTTAAGTTGGGAACGCGTCTATTTTGATTCAGCAATGCTTCAACACCACCTTG 25354 ||| ||||| | ||| ||||| | || |||||| || | |||||| || || |||| Sbjct 245 ACGGTTTTTAAGGTTTGGAACTCTTCGGCTTTGATCAAGAAGTGCTTCCACTCCTCCTTC 186 Query 25355 CTCAACCGCTTGTTGATAACGATAGAATGTATCTCGGCTCATTCCCATTACTTTGCAGGC 25414 || || || | | ||||| || |||||||||| | | ||||| ||| ||||| Sbjct 185 ATCCACAGCATCCCGGTAACGGTAAAATGTATCTCTGGAGACACCCATGGTTTTACAGGC 126 Query 25415 TTGAGAAATATTACCCAGTTCTTCTGCTAAATTTAATAAACCGGTCTTGTGTTTAATGA 25473 || ||| || || || ||||| ||||| | || | || ||| |||||| ||||||| Sbjct 125 TTTAGAGATGTTTCCGAGTTCATCTGCAAGGTTCAGTAGCCCGACCTTGTGCTTAATGA 67 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114090980499836