Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq109567 102 7e-17 >seq109567 Length=8344 Score = 102 bits (112), Expect = 7e-17 Identities = 148/209 (71%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101030 ACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCC 101089 |||| ||| | ||| |||||||| ||||| |||||||| | || ||| | ||||||| Sbjct 5772 ACCAAGTGAAGAGTGGATTCTTTCTGAATGTTGTAATCAGACAGGGTTCGGCCATCTTCC 5713 Query 101090 AATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCA 101149 | ||| ||||| ||| | || || | |||||||||| || | ||||||||||| | Sbjct 5712 AGTTGCTTGCCTGCAAAGATGAGACGTTGTTGGTCTGGTGGGATCCCTTCTTTGTCTTGA 5653 Query 101150 ATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTG 101209 ||||| |||||||| | | || || | | ||| | ||| || |||||| Sbjct 5652 ATTTTGGTTTTCACATTCTCAATGGTGTCGCTTGCTTCCACTTCTAGGGTTATTGTTTTG 5593 Query 101210 CCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || |||| ||||| | |||||| ||||| Sbjct 5592 CCAGTCAGGGTTTTCACAAAAATCTGCAT 5564 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 101042 GTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCCC 101101 ||||||||||| || |||||||| || | || ||| | |||||||| ||||||||| Sbjct 5076 GTTGATTCTTTCTGGATATTGTAGTCAGACAAGGTTCGGCCATCTTCCAGTTGTTTGCCA 5017 Query 101102 GCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTC 101161 || | || || | |||||| ||| || | |||||||||||| |||||| || Sbjct 5016 GCGAAAATGAGACGTTGTTGATCTGGCGGGATGCCTTCTTTGTCTTGAATTTTCGTCTTT 4957 Query 101162 ACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGTT 101221 |||| | | ||| || | | | ||| | || || || ||||| ||||| ||| Sbjct 4956 ACATTTTCAATCGTGTCGCTTGGCTCAACTTCTAGAGTGATCGTCTTGCCAGTCAAGGTT 4897 Query 101222 TTAATAAAAATTTGCAT 101238 || | ||||| ||||| Sbjct 4896 TTCACGAAAATCTGCAT 4880 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 101042 GTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCCC 101101 |||||||| || || |||||||| || | || ||| |||||||| ||| ||||| Sbjct 5532 GTTGATTCCTTCTGGATATTGTAGTCAGACAAGGTTCGACCATCTTCCAGTTGCTTGCCT 5473 Query 101102 GCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTC 101161 ||| | || || | |||||| ||| || | ||||||||||| ||| ||| ||| Sbjct 5472 GCAAAGATGAGACGTTGTTGATCTGGTGGGATTCCTTCTTTGTCTTGAATCTTTGTCTTC 5413 Query 101162 ACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGTT 101221 |||| | | || || | | | || | |||||||||||| || ||||| ||| Sbjct 5412 ACATTCTCAATTGTGTCGCTTGCCTCAACCTCAAGGGTAATAGTTTTACCAGTCAAGGTT 5353 Query 101222 TTAATAAAAATTTGCAT 101238 || | |||||| ||||| Sbjct 5352 TTCACAAAAATCTGCAT 5336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 408806776673727