Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Renilla_20reniformis_20[genbank_20GCA_5F900177555.1_202017-04-20] 171,053 sequences; 131,554,742 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq157723 123 3e-23 >seq157723 Length=4480 Score = 123 bits (136), Expect = 3e-23 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 23779 ATATATGTATCAATTAGTAAACTATACATTTCAGAATGAATATTTTCAATAGCAATCTGA 23838 || |||||||| || |||| ||||||||| || ||||| || ||||| || || || || Sbjct 3101 ATGTATGTATCTATGAGTAGACTATACATCTCTGAATGGATGTTTTCCATTGCTATTTGG 3160 Query 23839 AACCCATAAAAACATCTAGCTTCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAA 23898 || |||||||| || | |||||| | || ||| || || | | || | | | | || Sbjct 3161 AAACCATAAAAGCAACGAGCTTCTGGCACTTGTACTTCTTGTGAGAAACACTCAACCAAG 3220 Query 23899 TTTTCGTTAACAATACCATCACTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGT 23958 ||||| || |||||||||||||| ||||||||||| || | | || || |||||| Sbjct 3221 TTTTCATTCACAATACCATCACTGGCAGCAAAGAAGGCTAAGATATGAGAGATGAAATGT 3280 Query 23959 CTTTCATC 23966 |||||||| Sbjct 3281 CTTTCATC 3288 Score = 93.3 bits (102), Expect = 4e-14 Identities = 96/126 (76%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 23531 CTTCATCCCTACTAATCAATTCATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTT 23590 ||||||| || || || | ||||| || || ||||| || ||||| | || ||||| | Sbjct 2780 CTTCATCTCTGCTTATGAGCTCATTGGAGAAAGTTAAACCAGGCATAAGGCCACGTTTCT 2839 Query 23591 TAATCCAAAATATTGCAGCAAATGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGG 23650 | | |||||| || | ||||||||||| || ||||| || || |||||||| ||||| | Sbjct 2840 TCAGCCAAAAGATAGATGCAAATGATCCTGAGAAGAAGATGCCTTCAACAGCAGCAAAAG 2899 Query 23651 CCACAA 23656 | |||| Sbjct 2900 CTACAA 2905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 520372973914200