Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AC_000001.1 Length=33034 Score E Sequences producing significant alignments: (Bits) Value seq7310 152 1e-32 >seq7310 Length=770 Score = 152 bits (168), Expect = 1e-32 Identities = 335/498 (67%), Gaps = 3/498 (1%) Strand=Plus/Plus Query 9889 ACTGCTTACGAGCAGACAGTTAAAGAAGAAATTAACTTTCAAAAGACATTTAACAACAAC 9948 || || ||||| || || || || | || |||||||||| || | |||| |||| || Sbjct 63 ACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAAGC-TTTACCAACCAC 121 Query 9949 GTGCGGACATTAGTGTCTAGAGAGGAAGTGGCAATAGGGCTCATGCACTTGTGGGACTTT 10008 ||||| || | ||| | | ||||| ||||| ||| | || ||||| ||||||||||| Sbjct 122 GTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGACTTT 181 Query 10009 GTGGAAGCTTTTGTGGGCAACCCGTCGTCTAAGGCTCTCACGGCCCAGTTGTTTCTCATA 10068 || || | | | ||||| ||| | |||| ||| ||| |||| || ||| Sbjct 182 GTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTATA 241 Query 10069 GTGCAGCACTGCAGGGACGAAGGGGTGCTTAAAGAGTCTTTGCTTAACATTGCTGAGCCC 10128 ||||||||| ||||||| | | || | | || | |||| ||||| | |||||| Sbjct 242 GTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCCC 301 Query 10129 CCAAGTAAATGGCTGCTTGACCTTATTAACTTGCTGCAGACAATAATCGTGCAGGAGCG- 10187 | |||||||| || | || ||| | ||||||| ||| | ||||||||||| Sbjct 302 GAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGCGC 361 Query 10188 GGCTATGAGCCTCACTGAAAAAGTAGCGGCCATTAACTACTCAGTTATAACACTCAGCAA 10247 ||| ||||||| |||| || || || ||||||||||| || | | | || |||| Sbjct 362 AGCT-TGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCAA 420 Query 10248 GTATTACGCCAGGAAGGTTTTTAAGAGCATTTTTGTGCCCATAGACAAAGAAACAAAAAT 10307 || ||||||| | ||| | | | | | || || ||||||||||| || ||| || Sbjct 421 GTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAGAT 480 Query 10308 CACTACTTTTTACATGCGGATTGTAGTGAAGCTGCTAGTGTTGTGTGATGACTTAGGCAT 10367 | || |||||||| || | ||||| |||| ||| | || ||| | || | Sbjct 481 CGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAGCGT 540 Query 10368 GTACAGAAACGAGCGGAT 10385 || | |||||||| || Sbjct 541 TTATCGCAACGAGCGCAT 558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 105519341746240