Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AC_000002.1 Length=34446 Score E Sequences producing significant alignments: (Bits) Value seq7310 161 2e-35 >seq7310 Length=770 Score = 161 bits (178), Expect = 2e-35 Identities = 335/492 (68%), Gaps = 9/492 (2%) Strand=Plus/Plus Query 10396 GCTTACGAGCAAACGGTGAAGCAAGAGGCTAATTTTCAAAAGTCATTTAATAACCACGTG 10455 || ||||| || |||||||| || ||| ||| |||| || | |||| ||||||||| Sbjct 66 GCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAAGC-TTTACCAACCACGTG 124 Query 10456 CGGACACTGATCTCCCGCGAGGAGACCACCCTGGGTTTGATGCACTTGTGGGACTTTGCG 10515 || || || | | ||||||||| | | | ||||||| |||||||||||| Sbjct 125 CGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGACTTTGTA 184 Query 10516 GAGGCATACGCGCAGAACCCCGGCAGCAAGACCCTTACGGCCCAAGTCTTTCTCATCGTG 10575 || | ||| ||||| |||||| | || | ||| || | || || || ||| Sbjct 185 ATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTATAGTG 244 Query 10576 CAGCACTT---GCAAGATGAGGGCATTTTTGGGGAAGCTTTCTTAAGCATAGCAGAGCCC 10632 |||||| | | | |||| |||| |||| || | ||| ||||| ||||||| Sbjct 245 CAGCACACCAGGGACAACGAGG-CATTCA--GGGATGCGCTGCTAAACATAGTAGAGCCC 301 Query 10633 GAGGGACGATGGATGCTAGATCTGCTAAACATATTGCAGTCCATTGTGGTGCAAGAGCGC 10692 ||||| || ||| |||| ||| || ||||||| ||||| ||| |||||||| ||||| Sbjct 302 GAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGCG- 360 Query 10693 CAGCTTTCG-CTATCTGAAAAGGTAGCCGCGGTGAACTACTCCGTAGTTACCCTGGGCAA 10751 |||||| | || |||| ||||| ||||| | ||||| ||| | | | |||||||| Sbjct 361 CAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCAA 420 Query 10752 ACATTATGCCCGCAAGATCTTTAAGAGCCCCTTTGTGCCGCTTGACAAGGAGGTGAAGAT 10811 ||| ||||||||||| | | | ||| | || || | ||||||||||| ||||| Sbjct 421 GTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAGAT 480 Query 10812 CAGTACATTTTATATGCGCGCGGTGCTTAAGGTCCTGGGTCTAAGTCACGACCTGGGCAT 10871 | || || |||||| || | | ||||| || | || |||||||| || | Sbjct 481 CGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAGCGT 540 Query 10872 GTACAGAAACGA 10883 || | ||||| Sbjct 541 TTATCGCAACGA 552 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 110034837883520