Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AC_000003.1 Length=30536 Score E Sequences producing significant alignments: (Bits) Value seq7310 127 4e-25 >seq7310 Length=770 Score = 127 bits (140), Expect = 4e-25 Identities = 219/313 (70%), Gaps = 9/313 (3%) Strand=Plus/Plus Query 10059 GTAACAGCCTATGAGCACACTGTGAAGGCAGAAG-TTAACTTTCAAACAACCTTTAATAA 10117 ||||| || || || ||||| ||||| ||| || ||||||||| | || ||||| || Sbjct 60 GTAACCGCGTACGAACACACGGTGAAC-CAGGAGATTAACTTTCTGA-AAGCTTTACCAA 117 Query 10118 CAACGTGCGAACCCTTATAGCCAGGGAAGAGGTGGTTATTGGCCTGATGCATTTATGGGA 10177 | ||||||| || ||| | || | || ||||||| ||| | ||||||||| | ||||| Sbjct 118 CCACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGA 177 Query 10178 CTTTGTAGAGGCCTTTCTAGAG---AACCCAGTGAGCAAGGCTCTCACTGCCCAACTTTT 10234 ||||||| || || ||| |||||| |||||| | |||| || || || || Sbjct 178 CTTTGTAATCGC---GCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTT 234 Query 10235 TCTTATAGTTCAGCATTGTAGGGACGAGGGGGTACTACGGGAAAGTTTGCTTAATATTGC 10294 |||||||| ||||| |||||| | | || | | |||| |||| || || | Sbjct 235 CCTTATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGT 294 Query 10295 CGAACCCGAGAGCCGGTGGCTGGTAGACCTGTTAAACCTGTTACAAACAATCGTTGTGCA 10354 || |||||| |||| |||||| | || || ||||| | | || | || || ||||| Sbjct 295 AGAGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCA 354 Query 10355 AGAGCGAAGTTTG 10367 ||||| || ||| Sbjct 355 GGAGCGCAGCTTG 367 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 97530879033120