Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AC_000006.1 Length=35100 Score E Sequences producing significant alignments: (Bits) Value seq7310 549 4e-152 >seq7310 Length=770 Score = 549 bits (608), Expect = 4e-152 Identities = 525/673 (78%), Gaps = 8/673 (1%) Strand=Plus/Plus Query 11014 GGTGACGGCCTACGAGCAGACGGTGAAGCAGGAGCGCAACTTCCAAAAGAGTTTCAACAA 11073 ||| || || ||||| || |||||||| |||||| ||||| | || || || | ||| Sbjct 59 GGTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAA-AGCTTTACCAA 117 Query 11074 CCATGTGCGCACCCTGATCGCGCGCGAGGAGGTGGCCCTGGGCCTGATGCACCTGTGGGA 11133 ||| |||||||| || | || |||||||||||||| | | |||||||| |||||||| Sbjct 118 CCACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGA 177 Query 11134 CCTGGCGGAGGCCATCGTGCAGAACCCGGACAGCAAGCCTCTGACGGCGCAGCTGTTCCT 11193 | | | || | | ||| ||||| | |||||||| || | ||||||||||||||| Sbjct 178 CTTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 237 Query 11194 GGTGGTACAGCACAGCAGGGACAACGAGGCGTTCAGGGAGGCGCTGCTAAACATCGCCGA 11253 | || ||||||| ||||||||||||||| |||||||| |||||||||||||| | || Sbjct 238 TATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 297 Query 11254 GCCCGAGGGTCGCTGGCTGCTGGAGCTGATCAACATCTTGCAGAGCATCGTAGTTCAGGA 11313 ||||||||| ||||||||||| || |||| ||||| |||||||||| || || ||||| Sbjct 298 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 357 Query 11314 GCGCAGCCTGAGCTTGGCCGAGAAGGTGGCGGCAATCAACTACTCGGTGCTTAGCCTGGG 11373 ||||||| ||||| |||| || |||||||| || || ||||| || |||| || ||||| Sbjct 358 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 417 Query 11374 CAAGTTTTACGCGCGCAAGATTTACAAGACGCCGTACGTGCCCATAGACAAGGAGGTGAA 11433 |||||||||||| |||||||| ||| | || || ||||| ||||||||||||||||| || Sbjct 418 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 477 Query 11434 GATAGACAGCTTTTACATGCGCATGGCGCTCAAGGTGCTGACGCTGAGCGACGACCTGGG 11493 ||| || | || ||||||||||||||| | |||||||| || |||||||||||||| | Sbjct 478 GATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAG 537 Query 11494 CGTGTACCGCAACGACCGCATCCAC-AAGGCCGTGAGCGCGAGCCGGCGGCGCGAGCTGA 11552 ||| || |||||||| ||||||||| ||||||||||||| |||||||||||||||||| | Sbjct 538 CGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCA 597 Query 11553 GCGACCGCGAGCTGATGCTGAGCCTGCGCCGGGCGCTGGTAGG---GGGCNNNNNNNNNN 11609 |||||||||||||||||| ||||||| |||| |||| || |||| Sbjct 598 GCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGGCGATA 657 Query 11610 NNNAG---GAGTCYTACTTCGACATGGGGGCGGACCTGCATTGGCAGCCGAGCCGGCGCG 11666 || ||||| ||||| ||| ||| || ||||||| ||| || |||| |||| Sbjct 658 GAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCTACGCG 717 Query 11667 CCTTGGAGGCCGC 11679 || || | || || Sbjct 718 CCCTGTAAGCAGC 730 Lambda K H 0.634 0.408 0.914 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 112126292893280