Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AC_000008.1 Length=35938 Score E Sequences producing significant alignments: (Bits) Value seq7310 1175 0.0 >seq7310 Length=770 Score = 1175 bits (1302), Expect = 0.0 Identities = 690/713 (97%), Gaps = 2/713 (0%) Strand=Plus/Plus Query 11517 GGTAACCGCATACGAGCAGACGGTGAACCAGGAGATTAACTTTCAAAAAAGCTTTAACAA 11576 ||||||||| ||||| || ||||||||||||||||||||||||| ||| |||||| ||| Sbjct 59 GGTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAA-GCTTTACCAA 117 Query 11577 CCACGTGCGTACGCTTGTGGCGCGCGAGGAGGTGGCTATAGGACTGATGCATCTGTGGGA 11636 ||||||||| ||||||||||| |||||||||||||||||| ||||||||||||||||||| Sbjct 118 CCACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGA 177 Query 11637 CTTTGTAAGCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 11696 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 178 CTTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 237 Query 11697 TATAGTGCAGCACAGCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 11756 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 238 TATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 297 Query 11757 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATCCTGCAGAGCATAGTGGTGCAGGA 11816 |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| Sbjct 298 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 357 Query 11817 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATCAACTATTCCATGCTTAGCCTGGG 11876 |||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||| Sbjct 358 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 417 Query 11877 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 11936 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 418 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 477 Query 11937 GATCGAGGGGTTCTACATGCGCATGGCGCTGAAGGTGCTTACCTTGAGCGACGACCTGGG 11996 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 478 GATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAG 537 Query 11997 CGTTTATCGCAACGAGCGCATCCAC-AAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCA 12055 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 538 CGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCA 597 Query 12056 GCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGGCGATA 12115 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 598 GCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGGCGATA 657 Query 12116 GAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCGACGCG 12175 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 658 GAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCTACGCG 717 Query 12176 CCCTGGAGGCAGCTGGGGCCGGACCTGGGCTGGCGGTGGCACCCGCGCGCGCT 12228 ||||| | |||||||||||||||||||||||||||||||||| |||||||||| Sbjct 718 CCCTGTAAGCAGCTGGGGCCGGACCTGGGCTGGCGGTGGCACTCGCGCGCGCT 770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 114806169496000