Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AC_000009.1 Length=32621 Score E Sequences producing significant alignments: (Bits) Value seq7310 214 4e-51 >seq7310 Length=770 Score = 214 bits (236), Expect = 4e-51 Identities = 383/554 (69%), Gaps = 4/554 (1%) Strand=Plus/Plus Query 9751 ACCGCCTACCAGCAGACGGTGAAAGAGGAAGTTAATTTTCAAAAGACATTCAACAACAAT 9810 ||||| ||| | || |||||||| |||| |||| |||| || | || | |||| | Sbjct 63 ACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAAGCTTT-ACCAACCAC 121 Query 9811 GTGCGCACCCTGGTGTCCAGAGAGGAGGTGGCTGTGGGACTGATGCACTTGTGGGACTTT 9870 |||||||| || ||| | | |||||||||||| | |||||||||| ||||||||||| Sbjct 122 GTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGACTTT 181 Query 9871 GTGGAGGCGTATGTGGGTAACCCGTCCTCCAAGGCTCTGACGGCGCAGTTGTTCTTGATT 9930 || ||| | | ||||| |||| | || | ||||||| ||||| | || Sbjct 182 GTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTTATA 241 Query 9931 GTGCAACACTGCCGCGACGACGGTGTTCTCAAAGAGGCGCTTCTCAACATTGCCGAGCCG 9990 ||||| ||| | | ||| ||| | ||| || ||||| || ||||| | ||||| Sbjct 242 GTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAGCCC 301 Query 9991 GAAGGGCGGTGGTTGTTGGATCTGATAAACTTGTTACAGACCATCGTGGTTCAGGAGAGG 10050 || || || ||| || | ||| |||||||| | | |||| ||| ||||| |||||| | Sbjct 302 GAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAGCGC 361 Query 10051 -GCTCTGAGTCTGACGGAGAAAGTGGCCGCCATCAACTACTCCGTCATTACGCTGAGCAA 10109 ||| |||| ||| | || || ||||||||||| ||||| ||| | | | ||| |||| Sbjct 362 AGCT-TGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGCAA 420 Query 10110 ACACTACGCTAGAAAGATTTTCAAGACGGTGTTTGTGCCCATAGACAAGGAGACTAAGAT 10169 ||||| | ||||| | | | || | || ||||||||||||||| ||||| Sbjct 421 GTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAGAT 480 Query 10170 CACCACCTTTTACATGCGGGTGGTGGTAAAAGTTCTGGTGCTGAGCGACGACCTAGGCAT 10229 | || |||||||| ||| | | || || || ||||||||||||| || | Sbjct 481 CGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAGCGT 540 Query 10230 GTACCGCAACGAGCGCATGGA-GAGGGTGGTGAGCTCTTCCCGGAGGAGGGAGATGAGCG 10288 || |||||||||||||| | | || |||||| |||| || | ||| | |||| Sbjct 541 TTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCAGCG 600 Query 10289 ACCAAGAGTTGATG 10302 ||| ||| ||||| Sbjct 601 ACCGCGAGCTGATG 614 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104198591105520