Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AC_000010.1 Length=35524 Score E Sequences producing significant alignments: (Bits) Value seq7310 349 8e-92 >seq7310 Length=770 Score = 349 bits (386), Expect = 8e-92 Identities = 488/678 (72%), Gaps = 15/678 (2%) Strand=Plus/Plus Query 11328 GTATCAGCCTACGAGCAGACCGTGAAGGAGGAGCGCAACTTTCAAAAATCTTTCAACAAT 11387 ||| | || ||||| || || ||||| ||||| ||||||| ||| |||| | ||| Sbjct 60 GTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAAGCTTT-ACCAAC 118 Query 11388 CATGTGCGCACCCTGATTGCCCGCGAGGAGGTGACACTGGGTCTAATGCACCTGTGGGAC 11447 || |||||||| || | || |||||||||||| | | | || ||||| ||||||||| Sbjct 119 CACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGAC 178 Query 11448 CTGATGGAA--GCTATTACCCAGAACCCCACCAGCAAACCTCTGACCGCTCAGCTGTTTC 11505 | || || || | || ||||| | ||||| || || | || |||||||| | Sbjct 179 TT--TGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCC 236 Query 11506 TAGTGGTGCAACATAGCAGAGACAATGAGGCATTTAGGGAGGCGCTGTTGAACATCACTG 11565 | | ||||| || | ||| ||||| |||||||| ||||| |||||| | ||||| | Sbjct 237 TTATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAG 296 Query 11566 AGCCCGAGGGGAGATGGTTGTATGATCTTATCAATATTCTGCAAAGTATCATAGTGCAAG 11625 |||||||||| | ||| || ||| | || || |||||||| || || | ||||| | Sbjct 297 AGCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGG 356 Query 11626 AACGTAGCCTGGGTCTGGCTGAGAAGGTGGCTGCTATTAACTACTCGGTCTTAAGCCTGG 11685 | || ||| || | |||||||| |||||||| || |||||||| || | | || |||| Sbjct 357 AGCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGG 416 Query 11686 GCAAGCACTACGCTCGCAAGATCTATAAAACCCCATACGTACCTATAGACAAGGAGGTTA 11745 ||||| ||||| |||||||| || | ||||| ||||| || |||||||||||||| | Sbjct 417 GCAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAA 476 Query 11746 AGATAGATGGGTTTTATATGCGCATGACTCTCAAGGTGCTGACCTTGAGTGACGATCTGG 11805 |||| || ||||| || ||||||||| | | |||||||| |||||||| ||||| ||| Sbjct 477 AGATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGA 536 Query 11806 GAGTGTACCGCAACGACAGGATGCAC-CGTGCAGTGAGCGCCAGCAGAAGGCGTGAGCTG 11864 | || || |||||||| | || ||| || ||||||| ||| | |||| ||||| Sbjct 537 GCGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTC 596 Query 11865 AGCGACAGAGAACTTATGCACAGCTTGCAAAGAGCTCTGACGG----GGGCTG----GA- 11915 |||||| | || || ||||||||| ||||||| || ||| | | |||| | || Sbjct 597 AGCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGGCGAT 656 Query 11916 ACCGAGGGGGAGAACTACTTTGACATGGGAGCGGATTTGCAATGGCAGCCCAGTCGCAGG 11975 | |||| ||| |||||||||| ||| || || ||| ||| || || | | Sbjct 657 AGAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCTACGC 716 Query 11976 GCCCTGGACGCAGCAGGG 11993 |||||| | ||||| ||| Sbjct 717 GCCCTGTAAGCAGCTGGG 734 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113482220911840