Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AC_000011.1 Length=36519 Score E Sequences producing significant alignments: (Bits) Value seq7310 477 2e-130 >seq7310 Length=770 Score = 477 bits (528), Expect = 2e-130 Identities = 520/685 (76%), Gaps = 14/685 (2%) Strand=Plus/Plus Query 11269 GGTCACGGCGTACGAGCAGACCGTGAAGGAGGAGAGCAACTTCCAAAAATCCTTCAACAA 11328 ||| || |||||||| || || ||||| |||||| ||||| | ||| | || | ||| Sbjct 59 GGTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAAAGCTTT-ACCAA 117 Query 11329 CCACGTGCGCACCCTGATCGCGCGCGAGGAGGTGACCCTGGGCCTGATGCACCTGTGGGA 11388 |||||||||||| || | || |||||||||||| | | | |||||||| |||||||| Sbjct 118 CCACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGA 177 Query 11389 CCTGCTGGAGGCCATCGTGCAGAACCCCACCAGCAAGCCGCTGACGGCGCAGCTGTTCCT 11448 | | | || | | ||| ||||| | ||||||||||| | ||||||||||||||| Sbjct 178 CTTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCT 237 Query 11449 GGTGGTGCAGCATAGTCGGGACAACGAAGCGTTCAGGGAGGCGCTGCTGAATATCACCGA 11508 | |||||||| | |||||||||| || |||||||| |||||||| || || || Sbjct 238 TATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGA 297 Query 11509 GCCCGAGGGCCGCTGGCTCCTGGACCTGGTGAACATTCTGCAGAGCATCGTGGTGCAGGA 11568 |||||||||||||||||| || || || | ||||||||||||||||| ||||||||||| Sbjct 298 GCCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGA 357 Query 11569 GCGCGGGCTGCCGCTGTCCGAGAAGCTGGCGGCCATCAACTTCTCGGTGCTGAGTTTGGG 11628 |||| | || ||| | || ||| |||| ||||| |||| || |||| ||| |||| Sbjct 358 GCGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGG 417 Query 11629 CAAGTACTACGCTAGGAAGATCTACAAGACCCCGTACGTGCCCATAGACAAGGAGGTGAA 11688 ||||| ||||| | ||||| ||| | ||||| ||||| ||||||||||||||||| || Sbjct 418 CAAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAA 477 Query 11689 GATCGACGGGTTTTACATGCGCATGACCCTGAAAGTGCTGACCCTGAGCGACGATCTGGG 11748 |||||| ||||| |||||||||||| | |||| ||||| ||| |||||||||| ||| | Sbjct 478 GATCGAGGGGTTCTACATGCGCATGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAG 537 Query 11749 GGTGTACCGCAACGACAGGATGCAC-CGTGCGGTGAGCGCCAGCAGGCGGCGCGAGCTGA 11807 || || |||||||| | || ||| || ||||||| ||| ||||||||||||| | Sbjct 538 CGTTTATCGCAACGAGCGCATCCACAAAGGCCGTGAGCGTGAGCCGGCGGCGCGAGCTCA 597 Query 11808 GCGACCAGGAGCTGATGCATAGTCTGCAGCGGGCCCTGAC-----CGGG--GCCGGGACC 11860 |||||| ||||||||||| || ||||| |||||||| | |||| || | || Sbjct 598 GCGACCGCGAGCTGATGCACAGCCTGCAAAGGGCCCTGGCTGGCACGGGCAGCGGCGATA 657 Query 11861 GAGGGG--GAGAGCTACTTTGACATGGGCGCGGACCTGCACTGGCAGCCCAGCCGCCGGG 11918 ||| || ||| |||||||||| |||||| ||||||| |||| || |||| || | Sbjct 658 GAGAGGCCGAGTCCTACTTTGACGCGGGCGCTGACCTGCGCTGGGCCCCAAGCCTACGCG 717 Query 11919 CCTTGGAGGCGGC---GGCAGGACC 11940 || || | || || ||| ||||| Sbjct 718 CCCTGTAAGCAGCTGGGGCCGGACC 742 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 116664174634640