Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccoglossus_20kowalevskii_20[refseq_20GCF_5F000003605.2_202009-09- 09] 54,120 sequences; 775,840,395 total letters Query= AC_000020.1 Length=31323 Score E Sequences producing significant alignments: (Bits) Value seq7310 154 3e-33 >seq7310 Length=770 Score = 154 bits (170), Expect = 3e-33 Identities = 337/501 (67%), Gaps = 3/501 (1%) Strand=Plus/Plus Query 10156 GTCACGGCCTATGAGCATACTGTGAAGGCAGAGGTTAATTTTCAGACCACCTTTAACAAC 10215 || || || || || || || ||||| ||| |||| |||| || | ||||| |||| Sbjct 60 GTAACCGCGTACGAACACACGGTGAACCAGGAGATTAACTTTCTGAA-AGCTTTACCAAC 118 Query 10216 AATGTGCGTACCCTCATCGCCAGGGAAGAGGTGGTCATTGGCCTGATGCACTTGTGGGAC 10275 | ||||| || || | || | || ||||||| || | |||||||| |||||||| Sbjct 119 CACGTGCGCACGCTTGTGGCACGCGAGGAGGTGGCTATACGACTGATGCATCTGTGGGAC 178 Query 10276 TTTGTGGAGGCCTTTCTAGAAAACCCAGTGAGCAAGGCCCTCACTGCCCAGCTCTTTCTT 10335 ||||| || | |||||||| |||||| | |||| || ||||| || ||| Sbjct 179 TTTGTAATCGCGCTGGAGCAAAACCCAAATAGCAAGCCGCTCATGGCGCAGCTGTTCCTT 238 Query 10336 ATAGTGCAACACTGCAGGGACGAGGGGGTGCTGCGGGAAAGCTTGCTAAACATTGCCGAG 10395 |||||||| ||| ||||||| | | || | |||| |||||||||| | ||| Sbjct 239 ATAGTGCAGCACACCAGGGACAACGAGGCATTCAGGGATGCGCTGCTAAACATAGTAGAG 298 Query 10396 CCTGAGAGCCGGTGGCTGGTGGACCTGTTAAACCTGTTACAGACTATTGTGGTGCAAGAG 10455 || ||| |||| |||||| | || || ||||| | | |||| || |||||||| ||| Sbjct 299 CCCGAGGGCCGCTGGCTGCTCGATTTGATAAACATTCTGCAGAGCATAGTGGTGCAGGAG 358 Query 10456 CGAGGCTTGGCAGTTGGTGAAAAGGTAGCGGCTATAAACTACTCTGTGATTACCCTAAGT 10515 || ||||| | | ||| ||||| || || || ||||| || || | | || | Sbjct 359 CGCAGCTTGAGCCTGGCTGACAAGGTGGCCGCCATTAACTATTCCATGCTCAGTCTGGGC 418 Query 10516 AAACACTATGCAAGAAAGATATTCAACTCTGTGTTTGTGCCCATCGACAAGGAAGCCAAG 10575 || || || | ||||||| | | | | || ||||| |||||||| | ||| Sbjct 419 AAGTTTTACGCCCGCAAGATATACCATACCCCTTACGTTCCCATAGACAAGGAGGTAAAG 478 Query 10576 ATTAACACATTTTACATGCGCACTGTTGTT-AAGCTGCTGGTGCTGAGTGATGACCTTGG 10634 || | || |||||||||| || ||| ||| |||| |||| || ||||| | Sbjct 479 ATCGAGGGGTTCTACATGCGCA-TGGCGTTGAAGGTGCTTACCTTGAGCGACGACCTGAG 537 Query 10635 CATGTACCGCAATGAGCGGAT 10655 | | || ||||| ||||| || Sbjct 538 CGTTTATCGCAACGAGCGCAT 558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 100047660520400